Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN2BO60939 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN2BO60939 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
SCN2BO60939 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN2BO60939 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SCN2BO60939 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SCN2BO60939 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.89□□□□□ -1.47
SCN2BO60939 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 SNORA43.1-201ENST00000364863 140 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 AL033519.1-201ENST00000407266 307 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 UBTFL2-201ENST00000411859 1191 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN2BO60939 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN2BO60939 GTF3AP6-201ENST00000432585 986 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN2BO60939 AL590399.4-201ENST00000436561 601 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN2BO60939 RPL31P11-202ENST00000454082 372 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 RN7SL326P-201ENST00000477493 296 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN2BO60939 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 AP001858.2-201ENST00000536213 601 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.88□□□□□ -1.47
SCN2BO60939 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN2BO60939 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN2BO60939 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 HMGN2P47-201ENST00000559378 272 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 CCDC58P1-201ENST00000578567 430 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 AC024267.2-201ENST00000582737 417 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 DYNLL1P1-201ENST00000595442 269 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.88□□□□□ -1.47
SCN2BO60939 AL390877.1-201ENST00000605704 214 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN2BO60939 AC010998.3-201ENST00000613871 631 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
SCN2BO60939 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.88□□□□□ -1.47
SCN2BO60939 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 OR7E91P-202ENST00000642062 1198 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 AL591135.1-201ENST00000401578 5914 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN2BO60939 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN2BO60939 AL133243.2-201ENST00000610331 1621 ntBASIC5.88□□□□□ -1.47
SCN2BO60939 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SCN2BO60939 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
SCN2BO60939 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 GNG5P2-201ENST00000372054 207 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.87□□□□□ -1.47
SCN2BO60939 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 RN7SKP121-201ENST00000410842 305 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 AC128677.1-201ENST00000436016 442 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 PSMD8P1-201ENST00000436275 769 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 AC234771.4-201ENST00000441416 730 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 AL034369.1-201ENST00000453808 477 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.87□□□□□ -1.47
SCN2BO60939 AP003385.3-201ENST00000472498 287 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN2BO60939 AC114324.2-202ENST00000503812 134 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.87□□□□□ -1.47
SCN2BO60939 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN2BO60939 HMGN1P26-201ENST00000558737 303 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN2BO60939 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.87□□□□□ -1.47
SCN2BO60939 AC004890.3-201ENST00000605566 1095 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 MIR6774-201ENST00000614651 70 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
SCN2BO60939 AC114876.1-201ENST00000490962 1366 ntBASIC5.87□□□□□ -1.47
SCN2BO60939 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SCN2BO60939 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN2BO60939 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.87□□□□□ -1.47
SCN2BO60939 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SCN2BO60939 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SCN2BO60939 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms