Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.21□□□□□ -1.58
SDCBPO00560 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.21□□□□□ -1.58
SDCBPO00560 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.21□□□□□ -1.58
SDCBPO00560 CASP1P2-201ENST00000526830 1258 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 RPA2P3-201ENST00000533268 770 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.21□□□□□ -1.58
SDCBPO00560 AC009729.1-201ENST00000548873 1133 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 HMGN1P26-201ENST00000558737 303 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.21□□□□□ -1.58
SDCBPO00560 RN7SL371P-201ENST00000578099 267 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 RN7SL475P-201ENST00000583379 298 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.21□□□□□ -1.58
SDCBPO00560 AC020916.2-201ENST00000591242 360 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.21□□□□□ -1.58
SDCBPO00560 AC139792.1-201ENST00000607051 647 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.21□□□□□ -1.58
SDCBPO00560 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.21□□□□□ -1.58
SDCBPO00560 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SDCBPO00560 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.21□□□□□ -1.58
SDCBPO00560 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.21□□□□□ -1.58
SDCBPO00560 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SDCBPO00560 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SDCBPO00560 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.2□□□□□ -1.58
SDCBPO00560 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 AC217777.1-201ENST00000570034 1471 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.2□□□□□ -1.58
SDCBPO00560 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SDCBPO00560 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SDCBPO00560 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.2□□□□□ -1.58
SDCBPO00560 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.2□□□□□ -1.58
SDCBPO00560 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 RPL12P16-201ENST00000431098 498 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 RPEP4-201ENST00000437636 602 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 AL031681.1-201ENST00000443304 400 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.2□□□□□ -1.58
SDCBPO00560 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.2□□□□□ -1.58
SDCBPO00560 AC092865.1-201ENST00000544395 1023 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.2□□□□□ -1.58
SDCBPO00560 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.2□□□□□ -1.58
SDCBPO00560 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 AC009237.12-201ENST00000604755 742 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 SNORA74.4-201ENST00000607595 199 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
SDCBPO00560 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.2□□□□□ -1.58
SDCBPO00560 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 AL121839.2-201ENST00000565058 6943 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SDCBPO00560 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SDCBPO00560 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.2□□□□□ -1.58
SDCBPO00560 KYNUP3-201ENST00000574386 1341 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 AC078880.4-201ENST00000617627 1749 ntBASIC5.2□□□□□ -1.58
SDCBPO00560 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SDCBPO00560 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SDCBPO00560 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SDCBPO00560 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 RNA5SP85-201ENST00000365378 119 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SDCBPO00560 OR6R1P-201ENST00000431838 940 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 IGLV3-4-201ENST00000432300 244 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 EMC3-AS1-205ENST00000438698 534 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 GTF2IP14-201ENST00000441415 586 ntBASIC5.19□□□□□ -1.58
SDCBPO00560 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.19□□□□□ -1.58
SDCBPO00560 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.19□□□□□ -1.58
SDCBPO00560 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms