Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SLC28A1O00337 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC28A1O00337 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SLC28A1O00337 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
SLC28A1O00337 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC28A1O00337 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.98□□□□□ -1.45
SLC28A1O00337 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SLC28A1O00337 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC28A1O00337 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SLC28A1O00337 SNORA43.1-201ENST00000364863 140 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
SLC28A1O00337 AL096800.1-201ENST00000405326 893 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 MIR1266-201ENST00000408125 84 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 MEAF6P1-201ENST00000416092 327 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 RPL21P50-201ENST00000417698 477 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SLC28A1O00337 AC234771.4-201ENST00000441416 730 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.98□□□□□ -1.45
SLC28A1O00337 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SLC28A1O00337 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.98□□□□□ -1.45
SLC28A1O00337 AC112184.1-201ENST00000505179 312 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 KHDC1P1-201ENST00000511053 508 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 SLC25A51P2-201ENST00000535708 889 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.98□□□□□ -1.45
SLC28A1O00337 AC093524.1-201ENST00000564266 1094 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.98□□□□□ -1.45
SLC28A1O00337 AC107993.1-201ENST00000591343 684 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 AC036176.3-201ENST00000602456 418 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.98□□□□□ -1.45
SLC28A1O00337 AC010998.3-201ENST00000613871 631 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 MIR6503-201ENST00000622884 86 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.98□□□□□ -1.45
SLC28A1O00337 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC28A1O00337 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.98□□□□□ -1.45
SLC28A1O00337 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SLC28A1O00337 AC079248.1-201ENST00000427568 1546 ntBASIC5.98□□□□□ -1.45
SLC28A1O00337 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SLC28A1O00337 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SLC28A1O00337 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
SLC28A1O00337 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC28A1O00337 AC020656.2-201ENST00000613291 5309 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.97□□□□□ -1.45
SLC28A1O00337 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 AL033519.1-201ENST00000407266 307 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC28A1O00337 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.97□□□□□ -1.45
SLC28A1O00337 AL354707.3-201ENST00000427308 331 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 RPL34P27-201ENST00000428810 349 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 RPL31P11-202ENST00000454082 372 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 RN7SL352P-201ENST00000466002 277 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 RPL12P31-201ENST00000478433 450 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 RPS7P11-201ENST00000484240 586 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC28A1O00337 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.97□□□□□ -1.45
SLC28A1O00337 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC28A1O00337 AC026898.1-201ENST00000586404 571 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 AL008582.1-201ENST00000609612 442 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 AC069234.4-201ENST00000621276 412 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.97□□□□□ -1.45
SLC28A1O00337 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC28A1O00337 AL078595.2-201ENST00000605309 1780 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SLC28A1O00337 AL121768.1-201ENST00000613917 2544 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SLC28A1O00337 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.97□□□□□ -1.45
SLC28A1O00337 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 MIPEPP2-201ENST00000422560 1819 ntBASIC5.97□□□□□ -1.45
SLC28A1O00337 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.97□□□□□ -1.45
SLC28A1O00337 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
SLC28A1O00337 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SLC28A1O00337 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SLC28A1O00337 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SLC28A1O00337 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
SLC28A1O00337 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SLC28A1O00337 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SLC28A1O00337 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
SLC28A1O00337 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SLC28A1O00337 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SLC28A1O00337 MIR431-201ENST00000385266 114 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 VIM2P-201ENST00000402383 1294 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.96□□□□□ -1.46
SLC28A1O00337 AC002127.1-201ENST00000421305 225 ntBASIC5.96□□□□□ -1.46
SLC28A1O00337 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms