Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV4S1A1TA0A5B7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL359976.1-201ENST00000418655 3528 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SNORD35A-201ENST00000363389 86 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RNA5SP478-201ENST00000364657 115 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MIR188-201ENST00000385034 86 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL391419.1-201ENST00000398901 1275 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SNORA11.3-201ENST00000408471 128 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 U3.43-201ENST00000410734 213 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 UBE2V1P14-201ENST00000415815 558 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 CYP4F30P-202ENST00000420048 405 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC108479.1-201ENST00000431142 427 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PSMD10P2-201ENST00000432890 672 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 OR2L9P-201ENST00000444456 913 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL022237.1-201ENST00000446663 358 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC068491.1-201ENST00000449539 1241 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RN7SL254P-201ENST00000460609 284 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RPL5P14-201ENST00000494197 878 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC018797.1-201ENST00000510791 255 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL121579.2-201ENST00000555466 590 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC026826.3-201ENST00000561747 158 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC005632.2-201ENST00000564271 828 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC079315.1-201ENST00000602952 623 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SNORA11.6-201ENST00000619030 128 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL162377.2-201ENST00000624532 337 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 IMMTP1-201ENST00000435590 2219 ntBASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 BIN2P1-201ENST00000504996 1530 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 YWHAZP6-201ENST00000399764 738 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 MTND2P12-201ENST00000417560 1252 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC245884.2-201ENST00000426257 404 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC115283.1-201ENST00000427353 400 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC083862.1-201ENST00000427378 1242 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 GAPDHP59-201ENST00000435908 267 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 EMC3-AS1-205ENST00000438698 534 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AL645936.1-201ENST00000441979 518 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC079922.1-201ENST00000443291 359 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 POU5F1P5-201ENST00000445059 658 ntBASIC5.04□□□□□ -1.6
TCRBV4S1A1TA0A5B7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms