Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RN7SKP281-201ENST00000410472 352 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RN7SKP17-201ENST00000411242 351 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 MRPS21P5-201ENST00000417885 231 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 MED28P4-201ENST00000433137 572 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AL355032.1-201ENST00000472981 438 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC015524.1-201ENST00000491585 472 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC018645.1-201ENST00000505003 109 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC025283.1-201ENST00000572039 734 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 OR7A8P-201ENST00000595427 913 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RNA5SP439-201ENST00000617595 124 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AL109924.4-201ENST00000623089 670 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AL157831.2-201ENST00000564681 3095 ntBASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.75□□□□□ -1.65
HLA-DRB4X5D2U9 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 CAP1P2-201ENST00000417455 1409 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 RNA5SP478-201ENST00000364657 115 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 MIR551B-201ENST00000384984 96 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 UBE2V1P14-201ENST00000415815 558 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL354868.1-201ENST00000417077 482 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 OR6R1P-201ENST00000431838 940 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 PA2G4P1-201ENST00000442248 1197 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 RPL5P10-201ENST00000445207 894 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 RPS18P1-201ENST00000447840 458 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 Z83838.1-202ENST00000456225 839 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC093664.1-201ENST00000511779 289 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC124891.1-201ENST00000536322 519 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC009120.3-201ENST00000563335 499 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 RN7SL66P-201ENST00000582099 264 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL583832.1-201ENST00000603227 784 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 SNORA74.4-201ENST00000607595 199 ntBASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL353743.3-201ENST00000442109 1468 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms