Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AP000949.1-201ENST00000438328 629 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 RPL37AP8-201ENST00000494116 276 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC131392.1-201ENST00000506490 633 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC016144.1-201ENST00000548175 1087 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AL591767.3-201ENST00000554632 525 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC138473.1-201ENST00000605717 526 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 SNORA74.4-201ENST00000607595 199 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 MIR6811-201ENST00000620409 58 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AP003400.2-201ENST00000624036 666 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AL391261.1-201ENST00000555712 1479 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 API5P1-201ENST00000424316 1510 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AP001157.1-201ENST00000550837 2339 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ASNSP6-201ENST00000592770 1618 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 RNA5SP433-201ENST00000364491 114 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 RNA5SP279-201ENST00000365513 117 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 MIR188-201ENST00000385034 86 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 PMS2P9-201ENST00000441237 515 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC016724.1-201ENST00000453215 421 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 RN7SL254P-201ENST00000460609 284 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 RPL19P11-201ENST00000495944 589 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 H3F3AP3-201ENST00000497682 407 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 RNA5SP441-201ENST00000516809 88 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AP000919.1-201ENST00000582850 985 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC009303.3-201ENST00000591103 736 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 OR7A8P-201ENST00000595427 913 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AL049840.5-201ENST00000602827 552 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC016542.1-201ENST00000608259 493 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AC034229.6-201ENST00000623704 224 ntBASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SSX2IPQ9Y2D8 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.02□□□□□ -1.28
SSX2IPQ9Y2D8 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
SSX2IPQ9Y2D8 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
SSX2IPQ9Y2D8 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms