Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 SNX18P24-201ENST00000505249 671 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 TPM3P3-201ENST00000521343 354 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 OR9G2P-201ENST00000533326 880 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC008055.1-201ENST00000547032 609 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC023080.1-201ENST00000551663 931 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 NPM1P42-201ENST00000560329 862 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AL589743.6-201ENST00000611025 117 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 MIR6736-201ENST00000616799 59 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 KYNUP3-201ENST00000574386 1341 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC027575.3-201ENST00000583058 2747 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 OR5W1P-201ENST00000423705 938 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 GTF3AP6-201ENST00000432585 986 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 PPIAP10-201ENST00000438675 458 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 HMGN1P32-201ENST00000441744 256 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 RN7SL352P-201ENST00000466002 277 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 RN7SL83P-201ENST00000468131 297 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 OR4D12P-201ENST00000509361 911 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 OR5D2P-201ENST00000524390 911 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 CHEK2P2-201ENST00000554701 672 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AL583832.1-201ENST00000603227 784 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AC093388.1-201ENST00000609166 430 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 RN7SL261P-201ENST00000613441 282 ntBASIC5.8□□□□□ -1.48
VAPAQ9P0L0 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
VAPAQ9P0L0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 MSL3P1-202ENST00000440028 1468 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AL117344.1-201ENST00000407196 616 ntBASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.79□□□□□ -1.48
VAPAQ9P0L0 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms