Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 AC108724.2-201ENST00000634593 290 ntBASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 TARS2P1-201ENST00000506124 2041 ntBASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUEDC1Q9NWM3 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC108099.1-201ENST00000564402 3258 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 Y_RNA.9-201ENST00000362354 101 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 Y_RNA.450-201ENST00000384198 113 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 MIR128-2-201ENST00000384893 84 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 RNA5SP256-201ENST00000390978 113 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AL035419.1-201ENST00000397037 564 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 RNA5SP265-201ENST00000411023 111 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 RPS7P13-201ENST00000413955 498 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 PAICSP7-201ENST00000419829 962 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AL139421.1-201ENST00000423010 169 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 HMGN2P24-201ENST00000433516 273 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC073614.1-201ENST00000438690 650 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 YWHAZP2-201ENST00000440317 728 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 RPL36AP33-201ENST00000450395 310 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 RBM43P1-201ENST00000476891 1081 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AL449212.1-201ENST00000499853 517 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC025459.1-201ENST00000504072 156 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC112203.1-201ENST00000506315 1020 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC090071.1-201ENST00000507713 644 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 MTCO1P35-201ENST00000515270 228 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 RNU6-1045P-201ENST00000516321 107 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 OR4A11P-201ENST00000529557 906 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NPIPP1-203ENST00000547107 1071 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AL445383.1-201ENST00000554689 874 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 OR11J2P-201ENST00000555298 907 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC012360.2-201ENST00000609349 391 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC026951.2-201ENST00000613847 241 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC010205.1-201ENST00000616668 449 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC139769.3-201ENST00000618383 175 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AC109454.4-201ENST00000623411 649 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 AP000356.4-201ENST00000639500 172 ntBASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUEDC1Q9NWM3 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms