Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SLPI-201ENST00000338380 596 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 OR7E101P-201ENST00000400428 513 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 NPM1P40-201ENST00000412758 733 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC114402.1-201ENST00000427282 328 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 RPL23AP74-201ENST00000437246 471 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 ELOCP10-201ENST00000440624 327 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 CXCR2P1-202ENST00000443392 1074 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AL008718.1-201ENST00000445867 487 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 RNU7-136P-201ENST00000458819 69 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 NDUFA5P5-201ENST00000468361 342 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 E2F6P4-201ENST00000468625 514 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 HMGB1P29-201ENST00000505659 499 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC233724.11-201ENST00000508480 404 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 OR5M2P-201ENST00000529003 936 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 RPL21P5-201ENST00000554662 472 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC132938.1-201ENST00000566971 360 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 FAM222B-214ENST00000583953 564 ntTSL 4 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 ZNF814-208ENST00000596604 528 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 ELOCP34-201ENST00000604436 327 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 ITM2A-201ENST00000373298 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 AC034111.1-201ENST00000562143 3770 ntBASIC10.18□□□□□ -0.78
RTN4Q9NQC3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RTN4Q9NQC3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 VNN3-204ENST00000414302 1312 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ADH1C-204ENST00000515683 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 Y_RNA.453-201ENST00000384223 109 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 SNORD115.1-201ENST00000391109 76 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC092373.1-201ENST00000414951 490 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 NPM1P24-201ENST00000428039 894 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 Z99127.3-201ENST00000448158 395 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 RPSAP48-201ENST00000466509 889 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 DPH3P1-201ENST00000486648 249 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC093325.1-201ENST00000508378 326 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AP000797.3-201ENST00000537491 548 ntTSL 4 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ENSAP2-201ENST00000554405 352 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 BCO1-203ENST00000564552 949 ntTSL 2 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 MIR3194-201ENST00000582236 73 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ZNF222-203ENST00000587846 537 ntTSL 4 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC008751.1-201ENST00000600438 342 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 RPL12P48-201ENST00000605620 304 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC093726.2-201ENST00000609134 679 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 BSNDP1-201ENST00000613026 367 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 Metazoa_SRP.72-201ENST00000617458 278 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC016866.3-201ENST00000624037 714 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AP003400.3-201ENST00000624904 346 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC135068.6-201ENST00000625294 622 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 PISRT1-201ENST00000626175 531 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 LRRC77P-213ENST00000637727 880 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC183089.2-201ENST00000637931 916 ntBASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTN4Q9NQC3 AC145138.1-201ENST00000512908 2851 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms