Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AL359091.1-201ENST00000449048 1734 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 RN7SKP227-201ENST00000364445 330 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CYCSP52-201ENST00000422857 310 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 C4BPAP2-201ENST00000428434 478 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AL022331.1-201ENST00000429025 477 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 RPS26P41-201ENST00000450370 284 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 RPL23AP64-201ENST00000469465 435 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 UBE2CP1-201ENST00000557130 554 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC209154.1-201ENST00000582156 337 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CDY7P-201ENST00000429883 1604 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AL353807.3-201ENST00000500626 2505 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 RPL32P3-201ENST00000359025 275 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 SNRPEP6-201ENST00000407465 277 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC245028.1-201ENST00000423259 256 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AL451062.2-201ENST00000427515 271 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC122718.1-201ENST00000439448 744 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 FAM133DP-201ENST00000464802 691 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 NENFP3-201ENST00000503735 313 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC055733.3-201ENST00000505214 523 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 C1GALT1P3-201ENST00000522049 819 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC110056.1-201ENST00000525759 911 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AP000676.2-201ENST00000529711 301 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC015871.3-201ENST00000618835 2261 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AL591848.1-201ENST00000413092 322 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 RN7SL30P-201ENST00000488416 306 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 OR5AZ1P-201ENST00000527448 943 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 OR1F2P-201ENST00000570470 933 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 BNIP3P19-201ENST00000605397 577 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC022106.1-201ENST00000612834 766 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC026951.2-201ENST00000613847 241 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 MIR7703-201ENST00000620784 77 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC091953.3-201ENST00000623220 236 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 MAPK10-261ENST00000641050 3109 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 UGT2B27P-201ENST00000505092 1620 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 AC005225.5-201ENST00000623547 2225 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHD8Q9HCK8 PARP4P2-201ENST00000446672 3326 ntBASIC5.75□□□□□ -1.49
CHD8Q9HCK8 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHD8Q9HCK8 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms