Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC093524.1-201ENST00000564266 1094 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 PPIAP14-201ENST00000577627 496 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC011497.2-201ENST00000600255 639 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AL049840.5-201ENST00000602827 552 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC016597.2-201ENST00000613256 341 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC104763.3-201ENST00000613765 618 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC097460.3-201ENST00000623099 442 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC006328.2-201ENST00000623198 397 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC012005.2-201ENST00000624333 397 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 CASC19-228ENST00000641414 1684 ntBASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM54Q9BYV2 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 STAG3L4-201ENST00000352103 530 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 RNA5SP188-201ENST00000362916 129 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 RNA5SP350-201ENST00000363298 111 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 RNA5SP355-201ENST00000365317 135 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 RNU6-650P-201ENST00000365658 111 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 MTND1P10-201ENST00000426108 832 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 UBE2D3P3-201ENST00000426992 425 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 XKRY2-201ENST00000442362 1093 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 TVP23CP1-201ENST00000450317 639 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 RPL26P30-201ENST00000453533 435 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 RPL17P2-201ENST00000491913 451 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC008147.3-201ENST00000548666 354 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC018558.5-201ENST00000565840 952 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AL096803.3-201ENST00000609032 532 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC018926.1-201ENST00000616335 435 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC009269.6-201ENST00000621778 588 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 MKI67P1-201ENST00000604297 1460 ntBASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
TRIM54Q9BYV2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 AC095038.1-201ENST00000429248 1591 ntBASIC6.5□□□□□ -1.37
TRIM54Q9BYV2 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms