Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RNU6-1205P-201ENST00000363625 106 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 USF1-201ENST00000368019 998 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RNU6-979P-201ENST00000383896 107 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 MIR566-201ENST00000385187 94 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RPL15P3-201ENST00000391491 615 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AL590004.2-201ENST00000404787 371 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RNU2-32P-201ENST00000411193 191 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC092570.1-201ENST00000414446 469 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 EIF1AXP1-201ENST00000419267 435 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AL135790.2-201ENST00000437701 267 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AL663070.1-201ENST00000438210 725 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC010095.1-201ENST00000443543 144 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RPL39P40-201ENST00000445481 146 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 VOPP1-212ENST00000454227 610 ntTSL 4 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 TREX1-203ENST00000456089 629 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC008267.1-201ENST00000474858 1069 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC063943.2-201ENST00000495697 534 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC034207.1-201ENST00000506742 948 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC098591.1-202ENST00000507914 937 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 NUP210P2-201ENST00000510577 282 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC108471.1-201ENST00000513977 287 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC027801.3-201ENST00000515049 698 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 OR5M5P-201ENST00000529703 936 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC022880.2-201ENST00000532664 270 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 EEF1DP8-201ENST00000534760 536 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 PEBP1P1-201ENST00000554856 510 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AL157871.3-201ENST00000557231 293 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC133548.2-202ENST00000562267 148 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF192P1-203ENST00000565888 810 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 LITAF-207ENST00000571459 677 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 MIR4724-201ENST00000579485 89 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 MIR4706-201ENST00000582134 82 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF83-213ENST00000598536 522 ntTSL 4 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC008750.6-201ENST00000598746 322 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RN7SL341P-201ENST00000613745 298 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AL035470.1-201ENST00000622571 220 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC073592.2-201ENST00000623062 780 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ITGAM-201ENST00000287497 3595 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 GFM1-201ENST00000264263 3453 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ERCC6-203ENST00000447839 3411 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 BICD1-201ENST00000281474 3281 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 CHCHD5-202ENST00000409719 3272 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RAMP2-AS1-205ENST00000592670 3118 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF627-204ENST00000588174 2755 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 KDM4D-202ENST00000536741 2737 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 OLFML2B-203ENST00000367940 2685 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZEB2-217ENST00000470879 2648 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 STX16-203ENST00000358029 4329 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 CICP3-201ENST00000440782 2455 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 FAM71A-201ENST00000294829 2305 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 LINC01806-202ENST00000439050 2333 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ABCB9-204ENST00000392439 3791 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ABCB9-206ENST00000442028 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 C10orf53-202ENST00000374112 2130 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 LINC00974-201ENST00000456403 2141 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 AC105749.1-201ENST00000631338 2008 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 PROS2P-201ENST00000474651 1951 ntBASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 IKZF5-205ENST00000617859 4542 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP3-3Q9BYR6 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms