Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AL359976.1-201ENST00000418655 3528 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AL157884.1-201ENST00000424561 454 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 RN7SL39P-201ENST00000462264 297 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 RN7SL221P-201ENST00000466190 281 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 RNA5SP418-201ENST00000515951 117 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC026898.1-201ENST00000586404 571 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 AL589765.6-201ENST00000601909 549 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC012368.3-201ENST00000604190 219 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC005899.7-201ENST00000618199 588 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 AP002512.4-202ENST00000641599 4530 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 MSL3P1-202ENST00000440028 1468 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 AL353743.3-201ENST00000442109 1468 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL21A1Q96P44 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC092724.1-201ENST00000624623 3397 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 GUCY1B2-204ENST00000531898 1979 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 GNG5P2-201ENST00000372054 207 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 PRELID1P1-201ENST00000403549 660 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 RPL21P50-201ENST00000417698 477 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL21A1Q96P44 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC044810.1-201ENST00000480271 711 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 CYCSP25-201ENST00000525280 316 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL21A1Q96P44 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 OR4A40P-201ENST00000533878 948 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC063977.7-201ENST00000594454 337 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 AL589863.1-201ENST00000595383 631 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC073046.2-201ENST00000604756 527 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 AC011891.2-201ENST00000604949 397 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 PCA3_2.1-201ENST00000612507 409 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 MIR6823-201ENST00000622118 61 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 AP001153.1-201ENST00000641024 338 ntBASIC5.9□□□□□ -1.46
COL21A1Q96P44 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.9□□□□□ -1.46
COL21A1Q96P44 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.9□□□□□ -1.47
COL21A1Q96P44 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
COL21A1Q96P44 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL21A1Q96P44 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL21A1Q96P44 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL21A1Q96P44 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.9□□□□□ -1.47
COL21A1Q96P44 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL21A1Q96P44 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
COL21A1Q96P44 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.9□□□□□ -1.47
COL21A1Q96P44 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL21A1Q96P44 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.9□□□□□ -1.47
COL21A1Q96P44 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AOX3P-204ENST00000491025 2107 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms