Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AC016831.3-201ENST00000446451 1723 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.8□□□□□ -1
TRIM47Q96LD4 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC8.8□□□□□ -1
TRIM47Q96LD4 Y_RNA.359-201ENST00000365498 102 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
TRIM47Q96LD4 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 RNU6-354P-201ENST00000383862 107 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 RNU6-152P-201ENST00000384037 107 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 RNU6-610P-201ENST00000384264 107 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC8.8□□□□□ -1
TRIM47Q96LD4 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 RPS3AP37-201ENST00000419176 745 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 FABP7P1-201ENST00000424004 391 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 HMGB1P31-201ENST00000437242 427 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 ARF4P4-201ENST00000439608 520 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC8.8□□□□□ -1
TRIM47Q96LD4 PTENP1-201ENST00000447117 1215 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 USP9YP34-201ENST00000453983 808 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 RPL5P32-201ENST00000454085 879 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 RNU6-956P-201ENST00000458868 103 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 CREM-220ENST00000463314 964 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AC084754.1-201ENST00000463466 464 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC091874.2-201ENST00000505889 720 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AC008885.2-201ENST00000509506 930 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC113352.1-201ENST00000513196 666 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 RN7SKP34-201ENST00000516142 244 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 OR5AK3P-201ENST00000527486 1297 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
TRIM47Q96LD4 MED28P5-201ENST00000528254 438 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 OR5M4P-201ENST00000529436 925 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AP006296.1-201ENST00000537438 499 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AC090970.3-201ENST00000612566 866 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC090517.2-201ENST00000614966 680 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC010538.1-201ENST00000615131 663 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.8□□□□□ -1
TRIM47Q96LD4 AP005264.7-201ENST00000625003 745 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
TRIM47Q96LD4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.8□□□□□ -1
TRIM47Q96LD4 TRIM60P14-201ENST00000513444 1419 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 AC020904.2-202ENST00000614660 1401 ntBASIC8.8□□□□□ -1
TRIM47Q96LD4 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.8□□□□□ -1
TRIM47Q96LD4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.79□□□□□ -1
TRIM47Q96LD4 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 MAPK10-354ENST00000641823 2732 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
TRIM47Q96LD4 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.79□□□□□ -1
TRIM47Q96LD4 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC8.79□□□□□ -1
TRIM47Q96LD4 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.79□□□□□ -1
TRIM47Q96LD4 MIR16-2-201ENST00000362117 81 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 RNY4P24-201ENST00000362735 96 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
TRIM47Q96LD4 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
TRIM47Q96LD4 ATP5F1P4-201ENST00000397288 746 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 AL590004.1-201ENST00000405321 300 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 SNORA79B-201ENST00000410557 148 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 UBE2V1P9-201ENST00000414760 368 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.79□□□□□ -1
TRIM47Q96LD4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC8.79□□□□□ -1
TRIM47Q96LD4 OR6K4P-201ENST00000423179 955 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 MTND4P24-201ENST00000424002 397 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.79□□□□□ -1
TRIM47Q96LD4 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.79□□□□□ -1
TRIM47Q96LD4 AC093422.3-201ENST00000428506 305 ntBASIC8.79□□□□□ -1
TRIM47Q96LD4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.79□□□□□ -1
TRIM47Q96LD4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms