Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 SUMO2P8-201ENST00000434672 286 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 PNKDP1-201ENST00000435914 430 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 OR3D1P-201ENST00000438288 955 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 Y_RNA.710-201ENST00000516975 110 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 RNA5SP400-201ENST00000517155 111 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC009879.1-201ENST00000520029 839 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC011497.2-201ENST00000600255 639 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AC022106.1-201ENST00000612834 766 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 OR7A1P-202ENST00000641542 1158 ntBASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.24□□□□□ -1.41
ECHDC3Q96DC8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 DOCK11P1-201ENST00000553480 5932 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AP001541.1-201ENST00000623322 1904 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 HDAC1P2-201ENST00000453661 1398 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 SNORA21-201ENST00000362423 132 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 CXADRP1-201ENST00000398098 1095 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC130360.1-201ENST00000425489 1117 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 LDHAP2-201ENST00000437325 985 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AL451063.1-201ENST00000450164 1133 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 PPIAP7-201ENST00000454070 489 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 RN7SL165P-201ENST00000477476 291 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 RN7SKP70-201ENST00000516655 271 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC011853.1-201ENST00000518911 454 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 IGKV3D-25-201ENST00000519599 235 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC130365.2-201ENST00000525882 1201 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AP000620.1-201ENST00000527147 504 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 BCAS2P1-201ENST00000528022 632 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 OR6M2P-201ENST00000529831 871 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC008555.7-201ENST00000605008 583 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AL021368.3-201ENST00000607119 578 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 CXADRP3-202ENST00000617265 1100 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AC073592.6-201ENST00000624271 415 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AP001052.1-201ENST00000626421 99 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 AP001157.1-201ENST00000550837 2339 ntBASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.23□□□□□ -1.41
ECHDC3Q96DC8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC104966.1-201ENST00000467010 1464 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AP003486.1-201ENST00000525716 3994 ntBASIC6.22□□□□□ -1.41
ECHDC3Q96DC8 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms