Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPS17P11-201ENST00000474297 293 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 RN7SL868P-201ENST00000485915 303 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 RPL9P15-201ENST00000491096 532 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 HMGN1P17-201ENST00000513734 295 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC020937.1-201ENST00000519677 1013 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 CARSP2-201ENST00000520688 277 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 EEF1B2P1-201ENST00000567221 672 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 WDR45BP1-201ENST00000583470 1029 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC008759.1-201ENST00000589783 983 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC007349.4-201ENST00000608114 532 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 TUSC7.1-201ENST00000610969 165 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 PART1_2.1-201ENST00000612397 250 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC124312.6-202ENST00000623624 418 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC005753.1-201ENST00000623837 618 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 RPSAP68-201ENST00000625020 438 ntBASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.54□□□□□ -1.2
SHKBP1Q8TBC3 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC099654.3-201ENST00000447087 1546 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RNU6-468P-201ENST00000384003 109 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RNA5SP53-201ENST00000391299 120 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RN7SKP148-201ENST00000410179 275 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RN7SKP268-201ENST00000411107 316 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 OR8G2P-201ENST00000412796 908 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AL449283.1-202ENST00000418249 604 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 MTND4P20-201ENST00000424125 869 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RPS7P2-201ENST00000435134 607 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 MTND5P2-201ENST00000442927 1142 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AL845321.1-201ENST00000444603 348 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 GOT2P2-201ENST00000450663 1251 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 CEACAMP11-201ENST00000455211 583 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC027673.1-201ENST00000456245 405 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 YRDCP3-201ENST00000456507 480 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RN7SL790P-201ENST00000474043 298 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RN7SL655P-201ENST00000486087 298 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RPL5P14-201ENST00000494197 878 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RPL21P131-201ENST00000497298 483 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 MRPL57P6-201ENST00000506570 309 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 OR4A42P-201ENST00000531397 938 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 OR8G3P-201ENST00000533406 921 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AL512310.9-201ENST00000553311 948 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 BMS1P15-201ENST00000554269 1141 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC009101.1-201ENST00000568135 242 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AP002906.1-201ENST00000603405 233 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC024257.5-201ENST00000612739 531 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC025253.1-201ENST00000613623 543 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AL645927.2-201ENST00000618350 349 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 AC135068.11-201ENST00000636378 921 ntBASIC7.53□□□□□ -1.2
SHKBP1Q8TBC3 CASC19-264ENST00000641912 1184 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms