Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC117500.1-201ENST00000497352 755 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 SYPL1P2-201ENST00000582878 727 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC063977.7-201ENST00000594454 337 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC091193.1-201ENST00000604640 448 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 LSM1P2-201ENST00000604911 322 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC093635.1-201ENST00000609028 555 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL589743.6-201ENST00000611025 117 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 MIR6071-201ENST00000616741 78 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC073592.6-201ENST00000624271 415 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL162377.2-201ENST00000624532 337 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 SNX18P10-201ENST00000625014 519 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 CASC19-274ENST00000642018 970 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC027279.4-201ENST00000624371 2072 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 SNORA70.3-201ENST00000365075 132 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 SNORA70H-201ENST00000383910 135 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 SNORA70J-201ENST00000384182 135 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 YWHAZP4-201ENST00000392459 708 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 PSMA6P1-201ENST00000400275 741 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 AL360013.1-201ENST00000419031 858 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 RPS7P12-201ENST00000422385 582 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 OR5W1P-201ENST00000423705 938 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC239367.3-201ENST00000428996 814 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 ARMC4P1-201ENST00000438905 707 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 GAPDHP33-201ENST00000443168 1013 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 RPL5P10-201ENST00000445207 894 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC093166.3-201ENST00000448785 303 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 TVP23CP1-201ENST00000450317 639 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 H3F3AP5-201ENST00000475267 429 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 ASNSP4-201ENST00000511103 447 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC011853.1-201ENST00000518911 454 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 OR52K3P-201ENST00000531655 943 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC016144.1-201ENST00000548175 1087 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC092718.4-201ENST00000566639 716 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 RN7SL270P-201ENST00000579643 281 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AL589765.6-201ENST00000601909 549 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC114477.1-201ENST00000605097 605 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 U1.41-201ENST00000617626 165 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.22□□□□□ -1.73
SCXQ7RTU7 AC010325.3-201ENST00000641084 394 ntBASIC4.22□□□□□ -1.73
SCXQ7RTU7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCXQ7RTU7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms