Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 RPL5P2-201ENST00000429598 854 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC239800.1-201ENST00000442049 719 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 OR7E7P-201ENST00000455678 1012 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 MED28P7-201ENST00000456611 530 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 RPS4XP19-201ENST00000460237 736 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 CBX5P1-201ENST00000468470 561 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 PPP1R2P6-201ENST00000478565 588 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AC025271.1-201ENST00000485045 429 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC117500.1-201ENST00000497352 755 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AC106760.2-201ENST00000504159 619 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 ATG10-AS1-201ENST00000504846 648 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN1BQ07699 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 MTCYBP44-201ENST00000514835 823 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 RNU6-319P-201ENST00000516025 108 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 IGKV2D-38-201ENST00000518423 240 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC107952.1-201ENST00000524200 376 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 OR4A40P-201ENST00000533878 948 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 PSMC1P8-201ENST00000536820 1296 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN1BQ07699 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC027281.1-201ENST00000574178 758 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC020915.5-201ENST00000596836 964 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN1BQ07699 AC015922.4-201ENST00000612568 690 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.71□□□□□ -1.5
SCN1BQ07699 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN1BQ07699 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 TUBBP10-201ENST00000427668 1301 ntBASIC5.71□□□□□ -1.5
SCN1BQ07699 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN1BQ07699 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN1BQ07699 CASC19-260ENST00000641828 2001 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN1BQ07699 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN1BQ07699 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN1BQ07699 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN1BQ07699 SAMM50P1-201ENST00000455403 1399 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN1BQ07699 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN1BQ07699 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN1BQ07699 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCN1BQ07699 MIR137-201ENST00000385223 102 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCN1BQ07699 AL391419.1-201ENST00000398901 1275 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SCN1BQ07699 DHFRP5-201ENST00000406944 564 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN1BQ07699 AC007562.1-201ENST00000421819 517 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 CLCN3P1-201ENST00000423965 1017 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN1BQ07699 AC023274.2-201ENST00000445264 521 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN1BQ07699 RAB28P3-201ENST00000448325 597 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 RPL7L1P3-201ENST00000455249 689 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN1BQ07699 AC103563.5-201ENST00000455643 364 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.7□□□□□ -1.5
SCN1BQ07699 RPL23AP80-201ENST00000495605 424 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 AK4P6-201ENST00000505168 528 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 AC010409.2-201ENST00000505780 478 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 MRPL57P6-201ENST00000506570 309 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 UGT2A3P7-201ENST00000510485 734 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
SCN1BQ07699 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN1BQ07699 RN7SKP11-201ENST00000517018 287 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN1BQ07699 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN1BQ07699 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN1BQ07699 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN1BQ07699 PPIAP6-201ENST00000557078 499 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN1BQ07699 MIR378C-201ENST00000578683 81 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 RN7SL270P-201ENST00000579643 281 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.7□□□□□ -1.5
SCN1BQ07699 AC024085.1-201ENST00000604299 432 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms