Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC093816.1-201ENST00000515076 913 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 RN7SKP288-201ENST00000516227 268 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.15□□□□□ -1.59
SSBP1Q04837 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.15□□□□□ -1.59
SSBP1Q04837 AL133399.1-201ENST00000527476 298 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 AC126615.2-201ENST00000553003 515 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.15□□□□□ -1.59
SSBP1Q04837 AC027216.1-201ENST00000577726 685 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.15□□□□□ -1.59
SSBP1Q04837 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.15□□□□□ -1.59
SSBP1Q04837 AC141002.1-201ENST00000607025 279 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 RN7SL261P-201ENST00000613441 282 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 SNX18P12-201ENST00000624821 759 ntBASIC5.15□□□□□ -1.59
SSBP1Q04837 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SSBP1Q04837 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP1Q04837 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP1Q04837 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.15□□□□□ -1.59
SSBP1Q04837 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.15□□□□□ -1.59
SSBP1Q04837 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSBP1Q04837 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SSBP1Q04837 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SSBP1Q04837 RN7SKP185-201ENST00000362813 326 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 AC019178.1-201ENST00000392337 440 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP1Q04837 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC091492.1-201ENST00000419844 272 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 AL359633.1-201ENST00000421403 310 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 CRIP1P1-201ENST00000427567 185 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 MTND2P40-201ENST00000436718 841 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 RPS13P2-201ENST00000437890 455 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 PPIAP10-201ENST00000438675 458 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 RN7SL369P-201ENST00000477138 299 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 AC018475.1-201ENST00000478358 465 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP1Q04837 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 RPL7L1P7-201ENST00000509986 724 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP1Q04837 KHDC1P1-201ENST00000511053 508 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC078899.1-201ENST00000521432 1185 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AP001858.2-201ENST00000536213 601 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP1Q04837 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 EXOSC3P2-201ENST00000594464 497 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC007786.3-201ENST00000615154 596 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP1Q04837 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.14□□□□□ -1.59
SSBP1Q04837 TUBBP10-201ENST00000427668 1301 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
SSBP1Q04837 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC109446.4-201ENST00000623235 2755 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSBP1Q04837 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSBP1Q04837 AC024587.1-201ENST00000505925 2157 ntBASIC5.14□□□□□ -1.59
SSBP1Q04837 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.14□□□□□ -1.59
SSBP1Q04837 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSBP1Q04837 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.13□□□□□ -1.59
SSBP1Q04837 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSBP1Q04837 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSBP1Q04837 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SSBP1Q04837 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.13□□□□□ -1.59
SSBP1Q04837 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSBP1Q04837 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSBP1Q04837 RNU1-49P-201ENST00000363468 159 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SSBP1Q04837 RPSAP44-201ENST00000406712 884 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSBP1Q04837 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSBP1Q04837 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC5.13□□□□□ -1.59
SSBP1Q04837 AL589794.1-201ENST00000424971 390 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 AC009303.1-201ENST00000426307 352 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.13□□□□□ -1.59
SSBP1Q04837 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSBP1Q04837 CHCHD4P5-201ENST00000436684 427 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 MED28P3-201ENST00000444288 531 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 RPL6P24-201ENST00000445338 864 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC5.13□□□□□ -1.59
SSBP1Q04837 AL121578.2-201ENST00000448797 447 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.13□□□□□ -1.59
SSBP1Q04837 ACA64.4-201ENST00000459070 127 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC5.13□□□□□ -1.59
SSBP1Q04837 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.13□□□□□ -1.59
SSBP1Q04837 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.13□□□□□ -1.59
SSBP1Q04837 AC093870.1-201ENST00000506837 213 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms