Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 EEF1GP6-201ENST00000402309 905 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.25□□□□□ -1.41
NR1H2P55055 SNORA11.3-201ENST00000408471 128 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 GABARAPL3-201ENST00000412799 354 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NR1H2P55055 AC019070.1-201ENST00000415008 1024 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.25□□□□□ -1.41
NR1H2P55055 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NR1H2P55055 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 CHCHD4P5-201ENST00000436684 427 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 OR51P1P-201ENST00000447547 942 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 CCRL1P1-201ENST00000449542 1053 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 CEACAMP11-201ENST00000455211 583 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC063955.1-201ENST00000462872 685 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC044810.1-201ENST00000480271 711 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC098583.1-201ENST00000480875 255 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 RN7SL868P-201ENST00000485915 303 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 RN7SL518P-201ENST00000491887 280 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 RN7SKP34-201ENST00000516142 244 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 IGHV3-57-201ENST00000520143 280 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 BTG1P1-201ENST00000540396 508 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AP003115.1-201ENST00000569849 463 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.25□□□□□ -1.41
NR1H2P55055 RN7SL32P-201ENST00000580514 281 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
NR1H2P55055 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NR1H2P55055 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 NDUFB9P1-201ENST00000604683 510 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 AC067838.1-201ENST00000606064 577 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AC025171.4-201ENST00000607250 1047 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.25□□□□□ -1.41
NR1H2P55055 SNORA11.6-201ENST00000619030 128 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AL158062.1-201ENST00000619632 745 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AL354718.1-201ENST00000619764 589 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 RAB28P4-201ENST00000622233 665 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
NR1H2P55055 AC010401.2-201ENST00000575137 4934 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
NR1H2P55055 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.25□□□□□ -1.41
NR1H2P55055 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NR1H2P55055 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.25□□□□□ -1.41
NR1H2P55055 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NR1H2P55055 CDC27P2-201ENST00000425026 1922 ntBASIC6.25□□□□□ -1.41
NR1H2P55055 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.25□□□□□ -1.41
NR1H2P55055 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NR1H2P55055 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.25□□□□□ -1.41
NR1H2P55055 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.24□□□□□ -1.41
NR1H2P55055 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.24□□□□□ -1.41
NR1H2P55055 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 TRIM53CP-201ENST00000531490 1354 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NR1H2P55055 RN7SKP55-201ENST00000364888 307 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 SNORA70.5-201ENST00000365519 135 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
NR1H2P55055 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NR1H2P55055 RN7SKP268-201ENST00000411107 316 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 RN7SKP85-201ENST00000411349 318 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 HMGA1P8-201ENST00000414130 321 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC234781.4-201ENST00000419384 244 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 SNRPEP5-201ENST00000425442 278 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.24□□□□□ -1.41
NR1H2P55055 AC009518.3-201ENST00000438972 253 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AL356121.1-201ENST00000442911 156 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 AL161722.1-201ENST00000446972 1032 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AL500527.1-201ENST00000448532 255 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.24□□□□□ -1.41
NR1H2P55055 PSMA6P2-201ENST00000457574 686 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.24□□□□□ -1.41
NR1H2P55055 snoU13.29-201ENST00000459370 104 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC089999.1-201ENST00000460336 374 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC005165.2-201ENST00000466070 380 ntBASIC6.24□□□□□ -1.41
NR1H2P55055 AC091982.1-202ENST00000473923 343 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms