Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 MTCO3P42-201ENST00000509488 518 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 MTCO3P39-201ENST00000514812 518 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 AL133399.1-201ENST00000527476 298 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.46□□□□□ -1.38
LIMK1P53667 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 AC007225.2-201ENST00000562529 256 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 AC016180.1-201ENST00000567945 403 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 AC016839.1-201ENST00000578162 867 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 AC115989.2-201ENST00000578640 563 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 MIR3176-201ENST00000582210 90 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 BNIP3P32-201ENST00000600015 554 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 SYT14P1-202ENST00000600441 1448 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMK1P53667 RPSAP75-201ENST00000605848 301 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 SNORA74.4-201ENST00000607595 199 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMK1P53667 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMK1P53667 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMK1P53667 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMK1P53667 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LIMK1P53667 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
LIMK1P53667 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.46□□□□□ -1.38
LIMK1P53667 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.46□□□□□ -1.38
LIMK1P53667 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LIMK1P53667 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
LIMK1P53667 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 FO082842.1-201ENST00000423552 1370 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.45□□□□□ -1.38
LIMK1P53667 LINC01616-201ENST00000561816 2280 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LIMK1P53667 SNORA70.3-201ENST00000365075 132 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LIMK1P53667 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 RN7SKP108-201ENST00000411367 328 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMK1P53667 GTF3AP1-201ENST00000416942 1004 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 AL691447.1-201ENST00000419456 387 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.45□□□□□ -1.38
LIMK1P53667 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.45□□□□□ -1.38
LIMK1P53667 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 SULT1D1P-201ENST00000458020 882 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 AC012123.2-201ENST00000485809 248 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMK1P53667 AC036111.2-201ENST00000533247 901 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 AC092332.1-201ENST00000563684 829 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMK1P53667 OR7E18P-201ENST00000592589 702 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 AL080312.2-201ENST00000613001 630 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 FAM27E2-201ENST00000619668 403 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.45□□□□□ -1.38
LIMK1P53667 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.45□□□□□ -1.38
LIMK1P53667 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 AL121949.2-201ENST00000403446 1548 ntBASIC6.45□□□□□ -1.38
LIMK1P53667 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIMK1P53667 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.45□□□□□ -1.38
LIMK1P53667 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LIMK1P53667 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.44□□□□□ -1.38
LIMK1P53667 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 NAMPTP1-201ENST00000440465 2514 ntBASIC6.44□□□□□ -1.38
LIMK1P53667 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LIMK1P53667 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LIMK1P53667 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIMK1P53667 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LIMK1P53667 TMSB4XP4-201ENST00000323496 618 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms