Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 PRNCR1-201ENST00000635449 12727 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 SNORA43.1-201ENST00000364863 140 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AL354890.1-201ENST00000413730 346 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AL512605.1-202ENST00000441919 381 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AC016908.1-201ENST00000442571 1219 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 AL359955.2-201ENST00000445380 353 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.82□□□□□ -1.32
HOXC8P31273 VN1R38P-201ENST00000450265 887 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.82□□□□□ -1.32
HOXC8P31273 RPA2P3-201ENST00000533268 770 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXC8P31273 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 AC127024.6-201ENST00000621598 424 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AL357562.1-201ENST00000624911 609 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.82□□□□□ -1.32
HOXC8P31273 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 AC132825.8-201ENST00000640783 297 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
HOXC8P31273 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXC8P31273 AF287957.1-201ENST00000607368 1595 ntBASIC6.82□□□□□ -1.32
HOXC8P31273 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC8P31273 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
HOXC8P31273 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC8P31273 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXC8P31273 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXC8P31273 AC013488.1-201ENST00000526618 1838 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC8P31273 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXC8P31273 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXC8P31273 OR52B3P-201ENST00000314715 928 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 MIR640-201ENST00000385086 96 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 AC087752.1-201ENST00000391360 558 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC8P31273 RPL35AP3-201ENST00000414680 288 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 CYP4F30P-202ENST00000420048 405 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXC8P31273 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXC8P31273 AL512593.1-201ENST00000444758 779 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 CT45A11P-201ENST00000448043 1134 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 GEMIN2P1-201ENST00000454246 752 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 RN7SL174P-201ENST00000475578 289 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 AC092865.4-201ENST00000477936 615 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 AC022616.2-201ENST00000523185 300 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXC8P31273 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXC8P31273 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXC8P31273 AC096708.4-201ENST00000620563 552 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXC8P31273 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXC8P31273 OR7A1P-202ENST00000641542 1158 ntBASIC6.81□□□□□ -1.32
HOXC8P31273 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC8P31273 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXC8P31273 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXC8P31273 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
HOXC8P31273 OR13C1P-202ENST00000641378 2919 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC8P31273 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXC8P31273 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 AC139426.3-201ENST00000605648 2059 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
HOXC8P31273 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
HOXC8P31273 TMSB4XP2-201ENST00000335179 210 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 TRAV35-201ENST00000390462 330 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 AC097721.1-201ENST00000427150 1253 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXC8P31273 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC8P31273 AC092967.1-201ENST00000449016 481 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 RPL31P15-201ENST00000449770 338 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 RNF19BPY-201ENST00000458209 1550 ntBASIC6.8□□□□□ -1.32
HOXC8P31273 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC8P31273 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXC8P31273 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC8P31273 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXC8P31273 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC8P31273 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.8□□□□□ -1.32
HOXC8P31273 MIR3189-201ENST00000578735 73 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms