Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 THEM7P-201ENST00000419556 672 ntBASIC5.72□□□□□ -1.49
SHC1P29353 VN1R20P-201ENST00000425215 966 ntBASIC5.72□□□□□ -1.49
SHC1P29353 BX679664.2-201ENST00000439282 283 ntBASIC5.72□□□□□ -1.49
SHC1P29353 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 AC092967.1-201ENST00000449016 481 ntBASIC5.72□□□□□ -1.49
SHC1P29353 AC005165.2-201ENST00000466070 380 ntBASIC5.72□□□□□ -1.49
SHC1P29353 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.72□□□□□ -1.49
SHC1P29353 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.72□□□□□ -1.49
SHC1P29353 OR9A1P-202ENST00000484361 945 ntBASIC5.72□□□□□ -1.49
SHC1P29353 RN7SL568P-201ENST00000493069 298 ntBASIC5.72□□□□□ -1.49
SHC1P29353 AC091917.2-201ENST00000505002 744 ntBASIC5.72□□□□□ -1.49
SHC1P29353 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.72□□□□□ -1.49
SHC1P29353 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.72□□□□□ -1.49
SHC1P29353 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.72□□□□□ -1.49
SHC1P29353 AC005332.4-201ENST00000592752 579 ntBASIC5.72□□□□□ -1.49
SHC1P29353 AC079791.1-201ENST00000605356 973 ntBASIC5.72□□□□□ -1.49
SHC1P29353 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.72□□□□□ -1.49
SHC1P29353 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.72□□□□□ -1.49
SHC1P29353 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.72□□□□□ -1.49
SHC1P29353 AC125238.2-201ENST00000430003 1440 ntBASIC5.72□□□□□ -1.49
SHC1P29353 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.72□□□□□ -1.49
SHC1P29353 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHC1P29353 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHC1P29353 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHC1P29353 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.71□□□□□ -1.49
SHC1P29353 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.71□□□□□ -1.49
SHC1P29353 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SHC1P29353 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SHC1P29353 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHC1P29353 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHC1P29353 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.71□□□□□ -1.5
SHC1P29353 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SHC1P29353 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SHC1P29353 BIN2P1-201ENST00000504996 1530 ntBASIC5.71□□□□□ -1.5
SHC1P29353 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHC1P29353 RNA5SP514-201ENST00000363717 111 ntBASIC5.71□□□□□ -1.5
SHC1P29353 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.71□□□□□ -1.5
SHC1P29353 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.71□□□□□ -1.5
SHC1P29353 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.71□□□□□ -1.5
SHC1P29353 AC010086.1-201ENST00000437359 1052 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.71□□□□□ -1.5
SHC1P29353 VN1R38P-201ENST00000450265 887 ntBASIC5.71□□□□□ -1.5
SHC1P29353 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 RN7SL369P-201ENST00000477138 299 ntBASIC5.71□□□□□ -1.5
SHC1P29353 RN7SL714P-201ENST00000487050 298 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AL117692.1-201ENST00000494283 713 ntBASIC5.71□□□□□ -1.5
SHC1P29353 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHC1P29353 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.71□□□□□ -1.5
SHC1P29353 AC106800.3-201ENST00000511389 308 ntBASIC5.71□□□□□ -1.5
SHC1P29353 SNORA74.1-201ENST00000516320 180 ntBASIC5.71□□□□□ -1.5
SHC1P29353 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.71□□□□□ -1.5
SHC1P29353 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.71□□□□□ -1.5
SHC1P29353 CYCSP25-201ENST00000525280 316 ntBASIC5.71□□□□□ -1.5
SHC1P29353 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.71□□□□□ -1.5
SHC1P29353 AC009729.1-201ENST00000548873 1133 ntBASIC5.71□□□□□ -1.5
SHC1P29353 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHC1P29353 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.71□□□□□ -1.5
SHC1P29353 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.71□□□□□ -1.5
SHC1P29353 AC005632.2-201ENST00000564271 828 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.71□□□□□ -1.5
SHC1P29353 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.71□□□□□ -1.5
SHC1P29353 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.71□□□□□ -1.5
SHC1P29353 AC233702.7-202ENST00000582941 211 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 AL589863.1-201ENST00000595383 631 ntBASIC5.71□□□□□ -1.5
SHC1P29353 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AC005828.7-201ENST00000607331 556 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AL138960.1-201ENST00000613838 513 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AC016542.2-201ENST00000624201 619 ntBASIC5.71□□□□□ -1.5
SHC1P29353 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.71□□□□□ -1.5
SHC1P29353 AC010325.3-201ENST00000641084 394 ntBASIC5.71□□□□□ -1.5
SHC1P29353 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHC1P29353 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHC1P29353 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.71□□□□□ -1.5
SHC1P29353 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHC1P29353 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHC1P29353 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.71□□□□□ -1.5
SHC1P29353 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SHC1P29353 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SHC1P29353 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms