Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.22□□□□□ -1.25
POLR2AP24928 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
POLR2AP24928 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
POLR2AP24928 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.22□□□□□ -1.25
POLR2AP24928 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
POLR2AP24928 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.21□□□□□ -1.25
POLR2AP24928 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
POLR2AP24928 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
POLR2AP24928 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
POLR2AP24928 AC024587.1-201ENST00000505925 2157 ntBASIC7.21□□□□□ -1.25
POLR2AP24928 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
POLR2AP24928 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.21□□□□□ -1.25
POLR2AP24928 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
POLR2AP24928 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.21□□□□□ -1.26
POLR2AP24928 RNA5SP394-201ENST00000364216 119 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 AL445238.1-204ENST00000400311 463 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 AL139148.1-201ENST00000427122 680 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 AL390119.1-201ENST00000440329 312 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 AL163193.1-201ENST00000444895 788 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC7.21□□□□□ -1.26
POLR2AP24928 AC108693.1-201ENST00000496068 432 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 IGKV1D-22-201ENST00000518953 324 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.21□□□□□ -1.26
POLR2AP24928 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.21□□□□□ -1.26
POLR2AP24928 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.21□□□□□ -1.26
POLR2AP24928 AL136131.3-201ENST00000607600 188 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 AC037198.3-201ENST00000616754 526 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
POLR2AP24928 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
POLR2AP24928 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
POLR2AP24928 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.21□□□□□ -1.26
POLR2AP24928 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.21□□□□□ -1.26
POLR2AP24928 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
POLR2AP24928 AC062022.1-201ENST00000451026 1684 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
POLR2AP24928 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
POLR2AP24928 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
POLR2AP24928 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
POLR2AP24928 AC011416.1-201ENST00000514947 1732 ntBASIC7.21□□□□□ -1.26
POLR2AP24928 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
POLR2AP24928 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 AC245096.1-201ENST00000413104 546 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AL096829.1-201ENST00000413677 457 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.2□□□□□ -1.26
POLR2AP24928 RANP7-201ENST00000418085 644 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC126120.1-201ENST00000431082 470 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 CYCSP51-201ENST00000443545 318 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 AC118282.1-201ENST00000506408 765 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC106800.2-201ENST00000514009 1103 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.2□□□□□ -1.26
POLR2AP24928 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 HMGN2P36-201ENST00000529541 409 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 OR8G3P-201ENST00000533406 921 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.2□□□□□ -1.26
POLR2AP24928 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC7.2□□□□□ -1.26
POLR2AP24928 FO393422.1-201ENST00000603908 708 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 RPL21P136-201ENST00000605378 396 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AL445222.1-201ENST00000607259 628 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AL359513.1-201ENST00000614364 557 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC073429.2-201ENST00000569694 1444 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.2□□□□□ -1.26
POLR2AP24928 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 AC235565.1-201ENST00000456962 1325 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
POLR2AP24928 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.2□□□□□ -1.26
POLR2AP24928 RNU4-34P-201ENST00000410431 124 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 HSPE1P27-201ENST00000430808 296 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.2□□□□□ -1.26
POLR2AP24928 AC026254.2-201ENST00000475295 371 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 CAB39P1-201ENST00000502277 460 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 MTND3P3-201ENST00000505004 126 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.2□□□□□ -1.26
POLR2AP24928 RNU6-615P-201ENST00000516065 106 ntBASIC7.2□□□□□ -1.26
POLR2AP24928 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.2□□□□□ -1.26
POLR2AP24928 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.2□□□□□ -1.26
POLR2AP24928 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms