Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
NCK1P16333 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.78□□□□□ -1.48
NCK1P16333 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NCK1P16333 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NCK1P16333 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 NPM1P38-201ENST00000403835 865 ntBASIC5.78□□□□□ -1.48
NCK1P16333 SNORA77.2-201ENST00000408571 112 ntBASIC5.78□□□□□ -1.48
NCK1P16333 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 RN7SKP221-201ENST00000410420 301 ntBASIC5.78□□□□□ -1.48
NCK1P16333 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 AC017078.1-201ENST00000416146 368 ntBASIC5.78□□□□□ -1.48
NCK1P16333 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 RPS7P14-201ENST00000426405 583 ntBASIC5.78□□□□□ -1.48
NCK1P16333 VN1R53P-201ENST00000429536 957 ntBASIC5.78□□□□□ -1.48
NCK1P16333 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.78□□□□□ -1.48
NCK1P16333 GAPDHP23-201ENST00000444823 993 ntBASIC5.78□□□□□ -1.48
NCK1P16333 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 RBMY2EP-202ENST00000456360 940 ntBASIC5.78□□□□□ -1.48
NCK1P16333 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.78□□□□□ -1.48
NCK1P16333 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.78□□□□□ -1.48
NCK1P16333 AC124945.1-201ENST00000485133 188 ntBASIC5.78□□□□□ -1.48
NCK1P16333 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.78□□□□□ -1.48
NCK1P16333 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 ST13P12-201ENST00000508958 1094 ntBASIC5.78□□□□□ -1.48
NCK1P16333 AC008868.1-201ENST00000509786 737 ntBASIC5.78□□□□□ -1.48
NCK1P16333 TOMM22P4-201ENST00000511318 336 ntBASIC5.78□□□□□ -1.48
NCK1P16333 AC114940.1-201ENST00000512162 1265 ntBASIC5.78□□□□□ -1.48
NCK1P16333 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.78□□□□□ -1.48
NCK1P16333 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.78□□□□□ -1.48
NCK1P16333 RBMS2P1-201ENST00000525031 1226 ntBASIC5.78□□□□□ -1.48
NCK1P16333 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.78□□□□□ -1.48
NCK1P16333 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.78□□□□□ -1.48
NCK1P16333 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.78□□□□□ -1.48
NCK1P16333 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.78□□□□□ -1.48
NCK1P16333 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.78□□□□□ -1.48
NCK1P16333 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.78□□□□□ -1.48
NCK1P16333 WDR95P-201ENST00000425638 1542 ntBASIC5.78□□□□□ -1.48
NCK1P16333 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NCK1P16333 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.78□□□□□ -1.48
NCK1P16333 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.48
NCK1P16333 AC120036.2-201ENST00000509729 1474 ntBASIC5.77□□□□□ -1.49
NCK1P16333 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.77□□□□□ -1.49
NCK1P16333 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 RNA5SP308-201ENST00000362532 115 ntBASIC5.77□□□□□ -1.49
NCK1P16333 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 RN7SKP17-201ENST00000411242 351 ntBASIC5.77□□□□□ -1.49
NCK1P16333 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 CDC42P6-201ENST00000421246 576 ntBASIC5.77□□□□□ -1.49
NCK1P16333 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.77□□□□□ -1.49
NCK1P16333 MRPS21P3-201ENST00000436696 262 ntBASIC5.77□□□□□ -1.49
NCK1P16333 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 COL11A2P1-205ENST00000441798 676 ntBASIC5.77□□□□□ -1.49
NCK1P16333 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 AL162739.1-201ENST00000450606 307 ntBASIC5.77□□□□□ -1.49
NCK1P16333 AC022080.2-201ENST00000452932 533 ntBASIC5.77□□□□□ -1.49
NCK1P16333 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 RN7SL352P-201ENST00000466002 277 ntBASIC5.77□□□□□ -1.49
NCK1P16333 AC093719.1-201ENST00000480427 441 ntBASIC5.77□□□□□ -1.49
NCK1P16333 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
NCK1P16333 TRBV5-2-201ENST00000489095 273 ntBASIC5.77□□□□□ -1.49
NCK1P16333 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 AC093664.1-201ENST00000511779 289 ntBASIC5.77□□□□□ -1.49
NCK1P16333 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 SCARNA11.1-201ENST00000516918 132 ntBASIC5.77□□□□□ -1.49
NCK1P16333 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.77□□□□□ -1.49
NCK1P16333 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.77□□□□□ -1.49
NCK1P16333 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NCK1P16333 OOSP1P2-201ENST00000579644 351 ntBASIC5.77□□□□□ -1.49
NCK1P16333 DYNLL1P1-201ENST00000595442 269 ntBASIC5.77□□□□□ -1.49
NCK1P16333 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.77□□□□□ -1.49
NCK1P16333 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.77□□□□□ -1.49
NCK1P16333 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
NCK1P16333 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.77□□□□□ -1.49
NCK1P16333 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms