Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.94□□□□□ -1.14
HMGB1P09429 AC091304.4-201ENST00000565703 620 ntBASIC7.94□□□□□ -1.14
HMGB1P09429 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HMGB1P09429 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HMGB1P09429 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.94□□□□□ -1.14
HMGB1P09429 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.94□□□□□ -1.14
HMGB1P09429 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
HMGB1P09429 AC135803.1-201ENST00000608748 565 ntBASIC7.94□□□□□ -1.14
HMGB1P09429 AC003001.2-201ENST00000616294 831 ntBASIC7.94□□□□□ -1.14
HMGB1P09429 AC027506.1-201ENST00000621395 198 ntBASIC7.94□□□□□ -1.14
HMGB1P09429 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.94□□□□□ -1.14
HMGB1P09429 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HMGB1P09429 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
HMGB1P09429 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HMGB1P09429 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
HMGB1P09429 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
HMGB1P09429 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
HMGB1P09429 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 AC074141.1-201ENST00000588129 2995 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
HMGB1P09429 AL079341.1-201ENST00000404701 1207 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AL139100.1-201ENST00000408001 498 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 AC009303.1-201ENST00000426307 352 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 MTCYBP12-201ENST00000440559 1134 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 SNRPBP1-201ENST00000443634 282 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 NPM1P39-201ENST00000449818 867 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AL591363.1-201ENST00000450091 483 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 snoU109.6-201ENST00000516831 118 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 SETP17-201ENST00000534163 817 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 AL445383.1-201ENST00000554689 874 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.93□□□□□ -1.14
HMGB1P09429 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC011921.2-201ENST00000589465 152 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC124856.1-201ENST00000600819 896 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AP005131.7-201ENST00000610087 611 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AL354696.1-201ENST00000614652 497 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC006328.2-201ENST00000623198 397 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 AC012005.2-201ENST00000624333 397 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 AC013488.1-201ENST00000526618 1838 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 AC117409.1-201ENST00000470499 1310 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
HMGB1P09429 TRIM51GP-201ENST00000534741 1350 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.93□□□□□ -1.14
HMGB1P09429 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.93□□□□□ -1.14
HMGB1P09429 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.93□□□□□ -1.14
HMGB1P09429 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
HMGB1P09429 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 MFSD8-219ENST00000641228 2559 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 CASC19-284ENST00000642142 1868 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
HMGB1P09429 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
HMGB1P09429 RNA5SP429-201ENST00000363688 109 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.92□□□□□ -1.14
HMGB1P09429 RNU6-532P-201ENST00000384318 107 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 CCNB2P1-201ENST00000399411 1150 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.92□□□□□ -1.14
HMGB1P09429 MTND4LP14-201ENST00000429447 288 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 AL356133.1-201ENST00000444762 372 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 PFN1P11-201ENST00000445829 389 ntBASIC7.92□□□□□ -1.14
HMGB1P09429 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms