Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
P04436 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.73□□□□□ -1.49
P04436 AL137058.3-201ENST00000624531 3099 ntBASIC5.73□□□□□ -1.49
P04436 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
P04436 RNA5SP433-201ENST00000364491 114 ntBASIC5.73□□□□□ -1.49
P04436 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.73□□□□□ -1.49
P04436 RPS7P8-201ENST00000418311 581 ntBASIC5.73□□□□□ -1.49
P04436 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 RPSAP65-201ENST00000429660 595 ntBASIC5.73□□□□□ -1.49
P04436 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.73□□□□□ -1.49
P04436 AC007679.3-201ENST00000434035 414 ntBASIC5.73□□□□□ -1.49
P04436 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 AP002884.1-201ENST00000479691 655 ntBASIC5.73□□□□□ -1.49
P04436 PFN1P8-201ENST00000497012 543 ntBASIC5.73□□□□□ -1.49
P04436 MTND6P8-201ENST00000503471 522 ntBASIC5.73□□□□□ -1.49
P04436 AC009879.1-201ENST00000520029 839 ntBASIC5.73□□□□□ -1.49
P04436 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.73□□□□□ -1.49
P04436 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.73□□□□□ -1.49
P04436 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.73□□□□□ -1.49
P04436 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.73□□□□□ -1.49
P04436 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.73□□□□□ -1.49
P04436 AC079315.1-201ENST00000602952 623 ntBASIC5.73□□□□□ -1.49
P04436 AL139041.1-201ENST00000605480 610 ntBASIC5.73□□□□□ -1.49
P04436 AC091167.5-201ENST00000605689 894 ntBASIC5.73□□□□□ -1.49
P04436 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.73□□□□□ -1.49
P04436 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.73□□□□□ -1.49
P04436 AC025262.3-201ENST00000623666 360 ntBASIC5.73□□□□□ -1.49
P04436 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.73□□□□□ -1.49
P04436 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.73□□□□□ -1.49
P04436 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.73□□□□□ -1.49
P04436 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
P04436 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
P04436 HSPD1P9-201ENST00000420325 1636 ntBASIC5.73□□□□□ -1.49
P04436 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.73□□□□□ -1.49
P04436 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 CASC19-243ENST00000641588 1546 ntBASIC5.73□□□□□ -1.49
P04436 BRAFP1-201ENST00000445336 2703 ntBASIC5.73□□□□□ -1.49
P04436 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.73□□□□□ -1.49
P04436 IFIT1P1-201ENST00000400497 1449 ntBASIC5.73□□□□□ -1.49
P04436 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
P04436 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
P04436 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
P04436 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
P04436 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
P04436 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.72□□□□□ -1.49
P04436 AC020656.2-201ENST00000613291 5309 ntBASIC5.72□□□□□ -1.49
P04436 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
P04436 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 FABP5P2-201ENST00000439042 408 ntBASIC5.72□□□□□ -1.49
P04436 AMYP1-201ENST00000440059 1023 ntBASIC5.72□□□□□ -1.49
P04436 AL590004.3-202ENST00000445883 451 ntBASIC5.72□□□□□ -1.49
P04436 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.72□□□□□ -1.49
P04436 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 RBMY2BP-202ENST00000451071 1156 ntBASIC5.72□□□□□ -1.49
P04436 RPL34P33-201ENST00000486062 334 ntBASIC5.72□□□□□ -1.49
P04436 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.72□□□□□ -1.49
P04436 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 AC090958.1-201ENST00000511122 351 ntBASIC5.72□□□□□ -1.49
P04436 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.72□□□□□ -1.49
P04436 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 RNA5SP400-201ENST00000517155 111 ntBASIC5.72□□□□□ -1.49
P04436 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.72□□□□□ -1.49
P04436 AC073581.1-201ENST00000519036 575 ntBASIC5.72□□□□□ -1.49
P04436 AC036111.2-201ENST00000533247 901 ntBASIC5.72□□□□□ -1.49
P04436 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.72□□□□□ -1.49
P04436 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.72□□□□□ -1.49
P04436 AC073916.1-201ENST00000545095 130 ntBASIC5.72□□□□□ -1.49
P04436 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.72□□□□□ -1.49
P04436 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.72□□□□□ -1.49
P04436 DPPA3P2-201ENST00000553589 478 ntBASIC5.72□□□□□ -1.49
P04436 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.72□□□□□ -1.49
P04436 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.72□□□□□ -1.49
P04436 AL499605.1-201ENST00000604628 403 ntBASIC5.72□□□□□ -1.49
P04436 AC024255.1-201ENST00000614376 102 ntBASIC5.72□□□□□ -1.49
P04436 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.72□□□□□ -1.49
P04436 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
P04436 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.72□□□□□ -1.49
P04436 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
P04436 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
P04436 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms