Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.82□□□□□ -1.48
MT-ND1P03886 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 OR7A2P-201ENST00000304105 930 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 MIR138-2-201ENST00000384916 84 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 CDC42P6-201ENST00000421246 576 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AL139184.1-202ENST00000422303 222 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 ELOBP4-201ENST00000423418 296 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 MED28P4-201ENST00000433137 572 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AC135999.1-201ENST00000478962 479 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 SCARNA11.1-201ENST00000516918 132 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AC008429.4-201ENST00000521201 182 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AP002004.1-206ENST00000532441 876 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AC089984.3-201ENST00000552838 363 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 TPRX1P1-201ENST00000557620 319 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.82□□□□□ -1.48
MT-ND1P03886 RPL29P33-201ENST00000587474 316 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.82□□□□□ -1.48
MT-ND1P03886 RPL7AP69-201ENST00000595306 806 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AL589863.1-201ENST00000595383 631 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AL512430.4-201ENST00000603085 613 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.82□□□□□ -1.48
MT-ND1P03886 AL031658.2-201ENST00000616850 651 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AL353684.1-201ENST00000622677 1120 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
MT-ND1P03886 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.82□□□□□ -1.48
MT-ND1P03886 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
MT-ND1P03886 ICE2P1-201ENST00000512800 1849 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 AL353743.3-201ENST00000442109 1468 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
MT-ND1P03886 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.82□□□□□ -1.48
MT-ND1P03886 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 MIR27A-201ENST00000385073 78 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AL353133.1-201ENST00000407695 401 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
MT-ND1P03886 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.81□□□□□ -1.48
MT-ND1P03886 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 USP24P1-201ENST00000433802 779 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AL731534.1-201ENST00000434711 269 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 RPS3AP38-201ENST00000435889 763 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AL390879.1-201ENST00000439143 386 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AL020997.1-201ENST00000446554 349 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.81□□□□□ -1.48
MT-ND1P03886 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.81□□□□□ -1.48
MT-ND1P03886 RN7SL350P-201ENST00000492591 299 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC092865.1-201ENST00000544395 1023 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.81□□□□□ -1.48
MT-ND1P03886 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.81□□□□□ -1.48
MT-ND1P03886 OR7E19P-202ENST00000589942 844 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AC020916.2-201ENST00000591242 360 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AC004805.3-201ENST00000603178 310 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AL161912.3-201ENST00000605404 628 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.81□□□□□ -1.48
MT-ND1P03886 AC000095.2-202ENST00000637415 154 ntBASIC5.81□□□□□ -1.48
MT-ND1P03886 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
MT-ND1P03886 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.81□□□□□ -1.48
MT-ND1P03886 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MT-ND1P03886 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.81□□□□□ -1.48
MT-ND1P03886 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms