Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQA1P01909 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL157698.1-201ENST00000415190 1011 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 OR52S1P-201ENST00000427016 937 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL354707.3-201ENST00000427308 331 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL136231.1-201ENST00000429407 730 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL590128.1-201ENST00000433407 286 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC009518.3-201ENST00000438972 253 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL929410.2-201ENST00000451170 189 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 RARRES2P3-201ENST00000457739 473 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 GAPDHP53-201ENST00000458397 924 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 RN7SL654P-201ENST00000479178 292 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 RNA5SP318-201ENST00000516352 92 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC008429.2-201ENST00000523057 864 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 SNRPCP6-201ENST00000528310 210 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AP001646.2-201ENST00000528645 1156 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 OR6M2P-201ENST00000529831 871 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC244502.2-201ENST00000543361 851 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL445383.1-201ENST00000554689 874 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC009852.2-201ENST00000567898 485 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL008723.3-201ENST00000608926 449 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL136097.3-201ENST00000611097 505 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AL034546.1-201ENST00000623740 3693 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 UGT2B24P-201ENST00000514441 1597 ntBASIC4.65□□□□□ -1.67
HLA-DQA1P01909 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DQA1P01909 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 EEF1A1P16-201ENST00000325349 1414 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AP001541.1-201ENST00000623322 1904 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 RNA5SP429-201ENST00000363688 109 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 NPM1P31-201ENST00000399021 764 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 RN7SKP268-201ENST00000411107 316 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AL662791.3-201ENST00000413771 776 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AL929472.1-201ENST00000417484 429 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC091492.1-201ENST00000419844 272 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 SETP9-201ENST00000423837 832 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 SNRPEP5-201ENST00000425442 278 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 RPL5P25-201ENST00000441148 775 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 MED28P3-201ENST00000444288 531 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 PFN1P11-201ENST00000445829 389 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AC023271.1-201ENST00000445936 1090 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 RBMY2BP-202ENST00000451071 1156 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 RN7SL197P-201ENST00000466981 299 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 AL135933.1-201ENST00000498657 802 ntBASIC4.64□□□□□ -1.67
HLA-DQA1P01909 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DQA1P01909 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms