Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.87□□□□□ -0.99
RNF40O75150 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
RNF40O75150 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.87□□□□□ -0.99
RNF40O75150 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.87□□□□□ -0.99
RNF40O75150 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 LINC01180-201ENST00000589259 2025 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RNF40O75150 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.87□□□□□ -0.99
RNF40O75150 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 MTCO1P23-201ENST00000415223 1526 ntBASIC8.86□□□□□ -0.99
RNF40O75150 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.86□□□□□ -0.99
RNF40O75150 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 AC117529.2-201ENST00000512159 2068 ntBASIC8.86□□□□□ -0.99
RNF40O75150 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.86□□□□□ -0.99
RNF40O75150 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 FO393411.1-201ENST00000325612 420 ntBASIC8.86□□□□□ -0.99
RNF40O75150 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.86□□□□□ -0.99
RNF40O75150 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
RNF40O75150 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 AL589994.1-201ENST00000404962 340 ntBASIC8.86□□□□□ -0.99
RNF40O75150 ARF1P1-201ENST00000406466 544 ntBASIC8.86□□□□□ -0.99
RNF40O75150 MIR1269A-201ENST00000408636 105 ntBASIC8.86□□□□□ -0.99
RNF40O75150 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 NCOR1P3-201ENST00000420479 303 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AL513185.2-201ENST00000425543 193 ntBASIC8.86□□□□□ -0.99
RNF40O75150 TIMM9P3-201ENST00000428659 274 ntBASIC8.86□□□□□ -0.99
RNF40O75150 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 AC090954.1-201ENST00000445502 361 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 GAPDHP22-201ENST00000491037 413 ntBASIC8.86□□□□□ -0.99
RNF40O75150 CCDC11P1-201ENST00000503137 1162 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC108078.1-201ENST00000508073 725 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
RNF40O75150 RNA5SP101-201ENST00000517036 108 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.86□□□□□ -0.99
RNF40O75150 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.86□□□□□ -0.99
RNF40O75150 MTND6P20-201ENST00000522986 418 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 CBX3P5-201ENST00000552017 521 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC8.86□□□□□ -0.99
RNF40O75150 BCAP31P2-201ENST00000563143 399 ntBASIC8.86□□□□□ -0.99
RNF40O75150 BCAP31P1-201ENST00000565437 385 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC122134.1-201ENST00000565664 1104 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC8.86□□□□□ -0.99
RNF40O75150 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.86□□□□□ -0.99
RNF40O75150 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC8.86□□□□□ -0.99
RNF40O75150 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 MEMO1P5-201ENST00000604810 406 ntBASIC8.86□□□□□ -0.99
RNF40O75150 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC8.86□□□□□ -0.99
RNF40O75150 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.86□□□□□ -0.99
RNF40O75150 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.86□□□□□ -0.99
RNF40O75150 AC006065.6-201ENST00000625201 545 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AL121594.6-201ENST00000633440 261 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC8.86□□□□□ -0.99
RNF40O75150 AF001550.2-201ENST00000636643 217 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AC068205.4-201ENST00000637880 804 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AL121936.2-201ENST00000641935 662 ntBASIC8.86□□□□□ -0.99
RNF40O75150 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
RNF40O75150 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 AC079298.1-201ENST00000625026 1619 ntBASIC8.86□□□□□ -0.99
RNF40O75150 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
RNF40O75150 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RNF40O75150 ITPRIPL1-201ENST00000361124 4295 ntBASIC8.85□□□□□ -0.99
RNF40O75150 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AL008638.3-201ENST00000623027 5182 ntBASIC8.85□□□□□ -0.99
RNF40O75150 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.85□□□□□ -0.99
RNF40O75150 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 AL136146.1-201ENST00000529830 1667 ntBASIC8.85□□□□□ -0.99
RNF40O75150 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.85□□□□□ -0.99
RNF40O75150 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
RNF40O75150 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
RNF40O75150 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
RNF40O75150 RNU6-707P-201ENST00000364647 95 ntBASIC8.85□□□□□ -0.99
RNF40O75150 IARS-201ENST00000375627 697 ntTSL 3 BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms