Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 SOCS5P3-201ENST00000425115 1576 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC090774.4-201ENST00000578888 1372 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RN7SKP55-201ENST00000364888 307 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 MIR7-1-201ENST00000384871 110 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RNU11-6P-201ENST00000391127 133 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 CYP4F62P-201ENST00000417310 524 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RPA2P2-201ENST00000419698 796 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 OR6K4P-201ENST00000423179 955 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC007563.3-201ENST00000433233 371 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AL591623.2-201ENST00000449978 222 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 TCEAL4P1-201ENST00000453620 588 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC079594.1-201ENST00000489757 331 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 CDH12P2-201ENST00000504393 298 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 HAUS1P1-201ENST00000505275 832 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC093815.1-201ENST00000508637 280 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RNA5SP518-201ENST00000515957 119 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 COX6CP11-201ENST00000555293 229 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RN7SL689P-201ENST00000577215 297 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RPS27AP19-201ENST00000597285 458 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 RN7SL760P-201ENST00000607344 270 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC005277.2-201ENST00000617898 390 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 CR589904.1-203ENST00000636515 318 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AOX3P-204ENST00000491025 2107 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 MFSD8-219ENST00000641228 2559 ntBASIC6.62□□□□□ -1.35
HMGB1P1B2RPK0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AC015799.1-201ENST00000622996 3122 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AC012254.3-201ENST00000591183 2117 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AC025470.1-201ENST00000510053 2032 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AC092692.1-201ENST00000623625 2595 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 TMED5-201ENST00000370280 750 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 FAUP2-201ENST00000394301 401 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 PEX12P1-201ENST00000400284 1048 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 RN7SKP89-201ENST00000410774 242 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AC092651.1-201ENST00000426110 312 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 MORF4L1P4-201ENST00000450245 976 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 RPL7L1P3-201ENST00000455249 689 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 RN7SL221P-201ENST00000466190 281 ntBASIC6.61□□□□□ -1.35
HMGB1P1B2RPK0 AC021087.2-201ENST00000504656 1203 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms