Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 IGLV3-4-201ENST00000432300 244 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AL365220.1-201ENST00000432923 399 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 PA2G4P1-201ENST00000442248 1197 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC092601.1-201ENST00000444526 383 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 POU5F1P5-201ENST00000445059 658 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 RN7SL352P-201ENST00000466002 277 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC114324.2-202ENST00000503812 134 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 KHDC1P1-201ENST00000511053 508 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 TPM3P3-201ENST00000521343 354 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 TDGP1-201ENST00000543961 1229 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC008555.7-201ENST00000605008 583 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 RN7SL261P-201ENST00000613441 282 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 GAPDHP41-201ENST00000613707 975 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 MIR6811-201ENST00000620409 58 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC211486.4-201ENST00000621495 113 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AC024651.2-201ENST00000562480 2098 ntBASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRAV27A0A087WT01 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 EIF3EP1-201ENST00000433978 1316 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 SNORA64.3-201ENST00000365647 134 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC094019.1-201ENST00000434678 472 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AL022324.2-201ENST00000434827 780 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 RPEP4-201ENST00000437636 602 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AL390879.1-201ENST00000439143 386 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 HIGD1AP16-201ENST00000450986 258 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC124945.1-201ENST00000485133 188 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC018639.1-201ENST00000492994 442 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 HMGN1P26-201ENST00000558737 303 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC063977.7-201ENST00000594454 337 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC012065.3-201ENST00000602736 439 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC141002.1-201ENST00000607025 279 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 MIR6885-201ENST00000612241 66 ntBASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRAV27A0A087WT01 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 AC092646.2-201ENST00000431242 2095 ntBASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRAV27A0A087WT01 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms