Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL391419.1-201ENST00000398901 1275 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 SNORA81-201ENST00000408493 178 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 GNG5P5-201ENST00000420444 220 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AL139184.1-202ENST00000422303 222 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 PUDPP2-201ENST00000431423 643 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC027124.1-201ENST00000440852 466 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 MED28P7-201ENST00000456611 530 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC022730.1-201ENST00000473114 568 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AL035690.1-201ENST00000490892 383 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 RPL5P14-201ENST00000494197 878 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 SCARNA5-201ENST00000516201 276 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 IGKV2D-38-201ENST00000518423 240 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 COX6B1P4-201ENST00000519826 484 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC019322.1-201ENST00000571869 389 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 MIR4428-201ENST00000584884 73 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC027334.1-201ENST00000603257 310 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC019257.2-201ENST00000605539 497 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AL008723.3-201ENST00000608926 449 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 AC009950.2-201ENST00000636548 183 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 MAPK10-338ENST00000641647 3362 ntBASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
KCNIP3Q9Y2W7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 PSMC1P4-201ENST00000515236 1327 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC012078.1-201ENST00000405035 1646 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AL035467.1-201ENST00000403583 686 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 RPL5P20-201ENST00000403848 896 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AL590399.2-201ENST00000427536 309 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 GAPDHP33-201ENST00000443168 1013 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 RPS27AP3-201ENST00000453803 454 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 RN7SL37P-201ENST00000490461 307 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 MORF4L2P1-201ENST00000503761 858 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC027026.1-201ENST00000532323 742 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 SETP17-201ENST00000534163 817 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC009852.2-201ENST00000567898 485 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 WDR45BP1-201ENST00000583470 1029 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AL161931.1-201ENST00000612768 246 ntBASIC5.23□□□□□ -1.57
KCNIP3Q9Y2W7 AC005753.1-201ENST00000623837 618 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms