Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC023968.1-201ENST00000560719 475 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC002310.3-201ENST00000569728 723 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC004805.3-201ENST00000603178 310 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC024933.1-201ENST00000608472 348 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 MIR6071-201ENST00000616741 78 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC073862.4-201ENST00000622982 854 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 MIR1910-201ENST00000636955 80 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC005702.3-201ENST00000585345 1447 ntBASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SSX2IPQ9Y2D8 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 PSMD10P2-201ENST00000432890 672 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 RAD1P2-201ENST00000446414 663 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC025181.1-201ENST00000477507 416 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 OR9L1P-201ENST00000529493 933 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC006512.2-201ENST00000543250 486 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL162632.2-201ENST00000553933 399 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL731537.2-201ENST00000561565 951 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC106785.4-201ENST00000569492 412 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 RN7SL208P-201ENST00000577964 296 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 MIR5095-201ENST00000578844 88 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL355480.1-201ENST00000629041 99 ntBASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.05□□□□□ -1.28
SSX2IPQ9Y2D8 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC112243.1-201ENST00000623949 3851 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 RNA5SP77-201ENST00000365394 120 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 NPM1P25-201ENST00000429734 854 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC079807.1-201ENST00000429993 481 ntBASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.04□□□□□ -1.28
SSX2IPQ9Y2D8 AC245452.2-201ENST00000435222 392 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms