Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 AL359195.2-201ENST00000623657 4412 ntBASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.29□□□□□ -1.08
NPC1L1Q9UHC9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 RPS7P8-201ENST00000418311 581 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AL353662.1-201ENST00000439099 327 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 GEMIN2P1-201ENST00000454246 752 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 PRELID3BP3-201ENST00000584963 545 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AC073333.2-201ENST00000603589 769 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AL137246.2-201ENST00000613439 662 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 MIR6729-201ENST00000618194 65 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AC010480.1-201ENST00000624823 684 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 USP9YP3-201ENST00000434481 1766 ntBASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NPC1L1Q9UHC9 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NPC1L1Q9UHC9 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.08
NPC1L1Q9UHC9 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
NPC1L1Q9UHC9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NPC1L1Q9UHC9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.27□□□□□ -1.08
NPC1L1Q9UHC9 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC119674.1-202ENST00000641333 1860 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 RNU1-134P-201ENST00000362935 165 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC016027.4-201ENST00000450866 277 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AP005119.1-201ENST00000580956 292 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC007448.1-201ENST00000582714 234 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC008507.3-201ENST00000585753 472 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 AC004890.3-201ENST00000605566 1095 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 RFPL4AP6-201ENST00000616792 846 ntBASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NPC1L1Q9UHC9 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC093225.1-201ENST00000506867 1408 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 GNL2P1-201ENST00000451274 2190 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AL132875.1-201ENST00000403623 949 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 KIF4CP-201ENST00000422742 1279 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 RPL12P12-201ENST00000424633 501 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC016027.5-201ENST00000427227 210 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC068228.1-201ENST00000461723 211 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 LDHAP1-201ENST00000509421 992 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 SCARNA18.1-201ENST00000516330 83 ntBASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
NPC1L1Q9UHC9 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms