Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AL035422.1-201ENST00000414193 397 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC092651.1-201ENST00000426110 312 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 RPSAP41-201ENST00000439695 860 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AL645936.1-201ENST00000441979 518 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AL162739.1-201ENST00000450606 307 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC114982.2-201ENST00000461396 358 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 SNX18P25-201ENST00000510539 758 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC090958.1-201ENST00000511122 351 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC119403.2-201ENST00000590960 598 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 AC069234.4-201ENST00000621276 412 ntBASIC6.57□□□□□ -1.36
SIX2Q9NPC8 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.57□□□□□ -1.36
SIX2Q9NPC8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 RNU105B-201ENST00000364478 208 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 PSMA6P1-201ENST00000400275 741 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AL096829.1-201ENST00000413677 457 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 RPL23AP18-201ENST00000416139 468 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 Z82198.3-201ENST00000421145 199 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AL365220.1-201ENST00000432923 399 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 USP24P1-201ENST00000433802 779 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 OR3D1P-201ENST00000438288 955 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AC097359.1-201ENST00000447946 463 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AC073476.1-201ENST00000452854 407 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 RAB28P2-201ENST00000454299 641 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AL049779.3-201ENST00000557141 606 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AC004232.2-201ENST00000574245 821 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 HTR1DP1-201ENST00000616500 888 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 AP003486.1-201ENST00000525716 3994 ntBASIC6.56□□□□□ -1.36
SIX2Q9NPC8 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.56□□□□□ -1.36
SIX2Q9NPC8 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 MIR188-201ENST00000385034 86 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AL121977.1-201ENST00000401636 979 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AL096800.1-201ENST00000405326 893 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 RNU6-233P-201ENST00000410845 141 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms