Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 RPS2P45-201ENST00000469997 2057 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AL596448.1-201ENST00000415024 392 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 CEACAMP7-201ENST00000444105 496 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 RN7SL57P-201ENST00000493687 290 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 BNIP3P1-201ENST00000547295 580 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AP001496.3-201ENST00000580230 913 ntBASIC5.78□□□□□ -1.48
CHD8Q9HCK8 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CHD8Q9HCK8 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 Z84478.1-201ENST00000438230 1219 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AURKAPS1-201ENST00000451805 1212 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 RPS14P8-201ENST00000478778 369 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC099521.1-201ENST00000482557 334 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC040162.2-201ENST00000573092 157 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC087783.2-201ENST00000605070 562 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 GABARAPL3-201ENST00000412799 354 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC090958.1-201ENST00000511122 351 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 FAM27E4-201ENST00000605259 342 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC093278.2-201ENST00000564956 2485 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AL121835.2-201ENST00000624253 3502 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHD8Q9HCK8 AC013391.3-201ENST00000567484 1456 ntBASIC5.77□□□□□ -1.49
CHD8Q9HCK8 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AL359837.1-201ENST00000381357 287 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC234781.3-201ENST00000452540 973 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC022415.1-202ENST00000486612 523 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AL035422.2-201ENST00000603059 565 ntBASIC5.76□□□□□ -1.49
CHD8Q9HCK8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC5.76□□□□□ -1.49
CHD8Q9HCK8 AL353743.3-201ENST00000442109 1468 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms