Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNA5SP251-201ENST00000410614 137 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC007562.1-201ENST00000421819 517 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC125238.2-201ENST00000430003 1440 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC128677.1-201ENST00000436016 442 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC023274.2-201ENST00000445264 521 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 COX4I1P2-201ENST00000447446 547 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 VPS25P1-201ENST00000455691 508 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 RARRES2P3-201ENST00000457739 473 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 RN7SL714P-201ENST00000487050 298 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 GUSBP9-201ENST00000510138 584 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC093816.1-201ENST00000515076 913 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AC005332.4-201ENST00000592752 579 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AP000894.4-201ENST00000610185 483 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 AP000641.1-201ENST00000531988 1639 ntBASIC7.48□□□□□ -1.21
UPF3BQ9BZI7 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 SHQ1P1-201ENST00000437111 1544 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AC096921.2-201ENST00000561507 1916 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 USP9YP3-201ENST00000434481 1766 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 RPS7P14-201ENST00000426405 583 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AC023968.1-201ENST00000560719 475 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AC018558.5-201ENST00000565840 952 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AC006924.1-201ENST00000610750 559 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 MIR6729-201ENST00000618194 65 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 AC097634.1-201ENST00000604491 2467 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 QRSL1P1-201ENST00000400977 1540 ntBASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
UPF3BQ9BZI7 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 HDAC1P2-201ENST00000453661 1398 ntBASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 AL731532.1-201ENST00000623972 4236 ntBASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 AC092692.1-201ENST00000623625 2595 ntBASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.46□□□□□ -1.21
UPF3BQ9BZI7 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AL451046.1-201ENST00000406097 534 ntBASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AC002127.1-201ENST00000421305 225 ntBASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 OR13K1P-201ENST00000444577 975 ntBASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 AC027243.2-201ENST00000602530 724 ntBASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 WBP1LP12-201ENST00000604449 331 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms