Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC42Q96M95 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC42Q96M95 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 GAPDHP23-201ENST00000444823 993 ntBASIC6.63□□□□□ -1.35
CCDC42Q96M95 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC42Q96M95 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC42Q96M95 AL354872.1-201ENST00000456361 967 ntBASIC6.63□□□□□ -1.35
CCDC42Q96M95 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 RN7SL655P-201ENST00000486087 298 ntBASIC6.63□□□□□ -1.35
CCDC42Q96M95 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 AC009567.2-201ENST00000502989 349 ntBASIC6.63□□□□□ -1.35
CCDC42Q96M95 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC42Q96M95 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 AC023310.2-201ENST00000553844 547 ntBASIC6.63□□□□□ -1.35
CCDC42Q96M95 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.63□□□□□ -1.35
CCDC42Q96M95 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 MIR6849-201ENST00000618543 69 ntBASIC6.63□□□□□ -1.35
CCDC42Q96M95 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC42Q96M95 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC42Q96M95 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC092634.1-201ENST00000366505 199 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 RPS7P14-201ENST00000426405 583 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 KATNBL1P2-201ENST00000433311 835 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 EIF3LP2-201ENST00000457262 807 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AL079303.1-201ENST00000486611 463 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC134698.1-201ENST00000511619 643 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC093816.1-201ENST00000515076 913 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 CHEK2P2-201ENST00000554701 672 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 OR7E19P-202ENST00000589942 844 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC010998.3-201ENST00000613871 631 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 MIR6829-201ENST00000620375 67 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC009120.7-201ENST00000623452 780 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC42Q96M95 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 AC020656.2-201ENST00000613291 5309 ntBASIC6.62□□□□□ -1.35
CCDC42Q96M95 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC42Q96M95 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC42Q96M95 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 RNU1-49P-201ENST00000363468 159 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AP003385.1-201ENST00000426387 893 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 GTF3AP6-201ENST00000432585 986 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 PPIAP10-201ENST00000438675 458 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 EMC3-AS1-205ENST00000438698 534 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 RPL23AP60-201ENST00000450011 454 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 RPL5P33-201ENST00000487833 905 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC008055.1-201ENST00000547032 609 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 AL049779.3-201ENST00000557141 606 ntBASIC6.61□□□□□ -1.35
CCDC42Q96M95 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC42Q96M95 AC006120.1-201ENST00000579375 546 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms