Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 RBMY3AP-201ENST00000449381 1145 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 C1DP3-201ENST00000455013 423 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AC068228.1-201ENST00000461723 211 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AC022415.1-202ENST00000486612 523 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 RNA5SP206-201ENST00000516703 121 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 MTND2P17-201ENST00000550281 688 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 FAM60CP-201ENST00000591086 664 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AC007423.1-201ENST00000605009 627 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 WBP1LP8-201ENST00000617401 327 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AL354718.1-201ENST00000619764 589 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 LYARP1-201ENST00000436977 1501 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 MTCO1P25-201ENST00000414449 1799 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AL359976.1-201ENST00000418655 3528 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 MAPK10-383ENST00000642032 3390 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AL157702.1-201ENST00000398764 426 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 RN7SKP281-201ENST00000410472 352 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 RNU2-72P-201ENST00000411175 163 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 IPPKP1-201ENST00000422501 768 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 EIF2S2P3-201ENST00000428356 999 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC242426.1-201ENST00000435270 960 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 PPIAP20-201ENST00000449839 135 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC021074.2-201ENST00000468434 172 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 RPL12P30-201ENST00000488389 499 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 KCTD9P6-201ENST00000522306 950 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 OR9L1P-201ENST00000529493 933 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AP002345.2-201ENST00000609961 904 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 AC092821.3-202ENST00000641304 2767 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 MTND4P21-201ENST00000453886 1357 ntBASIC6.52□□□□□ -1.37
HMGB4Q8WW32 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB4Q8WW32 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.51□□□□□ -1.37
HMGB4Q8WW32 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB4Q8WW32 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms