Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC037198.3-201ENST00000616754 526 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AL445670.1-201ENST00000618889 801 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AC011815.2-201ENST00000618230 2021 ntBASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
CFAP43Q8NDM7 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 RAD17P2-201ENST00000451754 1977 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AL391262.1-201ENST00000556558 1992 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC006455.6-201ENST00000426192 893 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 RPS23P6-201ENST00000466136 431 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC244502.2-201ENST00000543361 851 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC011497.2-201ENST00000600255 639 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AL645933.2-201ENST00000606743 1207 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC012254.3-201ENST00000591183 2117 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 AC005618.1-201ENST00000606901 3148 ntBASIC9.53□□□□□ -0.88
CFAP43Q8NDM7 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
CFAP43Q8NDM7 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
CFAP43Q8NDM7 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
CFAP43Q8NDM7 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
CFAP43Q8NDM7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CFAP43Q8NDM7 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.88
CFAP43Q8NDM7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AC008171.1-201ENST00000395058 200 ntBASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 FMO7P-201ENST00000436045 768 ntBASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 GAPDHP58-201ENST00000438477 1006 ntBASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AC011742.2-201ENST00000443818 352 ntBASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AC127070.3-201ENST00000503695 3263 ntBASIC9.52□□□□□ -0.89
CFAP43Q8NDM7 AP000534.2-201ENST00000412729 568 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 RPS27P18-201ENST00000431701 247 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AC007386.1-201ENST00000455212 582 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 RN7SL329P-201ENST00000467740 299 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 C4BPAP1-201ENST00000415474 1893 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 RN7SKP115-201ENST00000363177 317 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 RNA5SP333-201ENST00000363466 118 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 RN7SKP124-201ENST00000364730 341 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 RNA5SP334-201ENST00000364825 118 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AL596448.1-201ENST00000415024 392 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms