Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TTC9CQ8N5M4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5□□□□□ -1.61
TTC9CQ8N5M4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5□□□□□ -1.61
TTC9CQ8N5M4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TTC9CQ8N5M4 AC123769.1-201ENST00000530992 3192 ntBASIC5□□□□□ -1.61
TTC9CQ8N5M4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5□□□□□ -1.61
TTC9CQ8N5M4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
TTC9CQ8N5M4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
TTC9CQ8N5M4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC027575.3-201ENST00000583058 2747 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 GUCY1B2-204ENST00000531898 1979 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RNA5SP115-201ENST00000411160 107 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC116036.1-201ENST00000412199 367 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL360013.1-201ENST00000419031 858 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RPEP4-201ENST00000437636 602 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC092967.1-201ENST00000449016 481 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RN7SL714P-201ENST00000487050 298 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC015524.1-201ENST00000491585 472 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RNA5SP418-201ENST00000515951 117 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC113191.1-201ENST00000517759 403 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC124891.1-201ENST00000536322 519 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC008055.1-201ENST00000547032 609 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC005332.4-201ENST00000592752 579 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL589863.1-201ENST00000595383 631 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RPL12P48-201ENST00000605620 304 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC068726.1-201ENST00000610993 341 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 MIR7159-201ENST00000620587 66 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL442128.2-201ENST00000620246 1824 ntBASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TTC9CQ8N5M4 AL136984.1-201ENST00000607611 1893 ntBASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 AC009831.5-201ENST00000624000 3189 ntBASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 AC092692.1-201ENST00000623625 2595 ntBASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TTC9CQ8N5M4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms