Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC021193.1-201ENST00000511607 420 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC008494.2-201ENST00000514544 370 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 RN7SKP233-201ENST00000517005 110 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 GLYATL1P4-201ENST00000529326 906 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC244502.2-201ENST00000543361 851 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC138207.8-204ENST00000579588 527 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 MIR4428-201ENST00000584884 73 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 MIR6885-201ENST00000612241 66 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPAS4Q8IUM7 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC105402.1-201ENST00000413336 545 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 VTA1P1-201ENST00000414044 866 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 RPL18AP14-201ENST00000417685 526 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ELOCP9-201ENST00000418624 239 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 RPL3P11-201ENST00000434028 1146 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 RPL5P4-201ENST00000434805 886 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 NPM1P9-201ENST00000453156 844 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 RN7SL502P-201ENST00000481857 290 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 RN7SKP248-201ENST00000516278 305 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 IGLVI-42-201ENST00000522485 381 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 DUXAP6-201ENST00000553858 601 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 MIR4312-201ENST00000579909 76 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AP001269.3-201ENST00000588718 329 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms