Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ARL4AP2-201ENST00000507378 601 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 CBX3P3-201ENST00000508108 532 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 FABP5P5-201ENST00000515537 406 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 RNU6-319P-201ENST00000516025 108 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 TMEM97P2-201ENST00000517841 403 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 PTTG3P-201ENST00000521862 606 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 NOP56P3-201ENST00000549457 385 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC013283.1-201ENST00000557282 492 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC090695.1-201ENST00000561269 1222 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC105275.2-201ENST00000567907 711 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 MTCO3P13-201ENST00000577757 781 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 MIR5192-201ENST00000579892 92 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC079880.2-201ENST00000603790 1213 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AL451074.6-201ENST00000608512 729 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 MIR7162-201ENST00000611134 69 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 ZNF680P1-201ENST00000436625 1469 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 SGO1P2-201ENST00000429458 1589 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 AP003471.1-202ENST00000319051 1988 ntBASIC6.77□□□□□ -1.33
ATG4DQ86TL0 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ATG4DQ86TL0 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL078621.1-201ENST00000272567 768 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RN7SKP1-201ENST00000365525 307 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RNU6-1119P-201ENST00000384349 108 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 SNORA26.8-201ENST00000391306 124 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC004074.1-201ENST00000421810 1063 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 SNX18P14-201ENST00000429308 574 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RPS26P4-201ENST00000431743 355 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 MTCO1P43-201ENST00000431831 488 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 NDUFS5P5-201ENST00000437256 321 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC019185.3-201ENST00000438805 323 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 MTND5P20-201ENST00000448677 143 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC022730.2-201ENST00000465359 452 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RPL31P58-201ENST00000469001 379 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RN7SL549P-201ENST00000478997 282 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 RN7SL647P-201ENST00000485429 300 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 MYL12BP2-201ENST00000503948 512 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 PRELID3BP4-201ENST00000515476 571 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 Y_RNA.702-201ENST00000516843 96 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 HMGB1P46-201ENST00000520062 610 ntBASIC6.76□□□□□ -1.33
ATG4DQ86TL0 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.76□□□□□ -1.33
ATG4DQ86TL0 AC004923.2-201ENST00000529649 369 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms