Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 RNA5SP152-201ENST00000365184 110 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AL079341.1-201ENST00000404701 1207 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC024937.2-201ENST00000411669 1242 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC000089.1-201ENST00000424559 801 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC103563.5-201ENST00000455643 364 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 SNX18P26-201ENST00000458433 740 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC090589.1-201ENST00000473109 362 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 OR2A3P-201ENST00000493774 953 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC007068.2-201ENST00000543168 395 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC012414.2-201ENST00000559474 187 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC007494.1-201ENST00000562293 760 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 OR4H6P-201ENST00000563771 921 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 DNM1P47-203ENST00000571780 12667 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 MIR3159-201ENST00000584572 74 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 OR7M1P-201ENST00000608946 533 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC009283.1-201ENST00000615852 645 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AL445649.1-201ENST00000615941 691 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC253576.2-201ENST00000618815 580 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 FO681491.1-202ENST00000623392 737 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC005858.3-201ENST00000624756 589 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 AC135068.11-201ENST00000636378 921 ntBASIC5.78□□□□□ -1.48
SHFQ7M4L6 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SHFQ7M4L6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHFQ7M4L6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.77□□□□□ -1.48
SHFQ7M4L6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHFQ7M4L6 PSMC1P6-201ENST00000477233 1319 ntBASIC5.77□□□□□ -1.49
SHFQ7M4L6 AC018628.1-201ENST00000624147 3819 ntBASIC5.77□□□□□ -1.49
SHFQ7M4L6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHFQ7M4L6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHFQ7M4L6 RBPJP6-201ENST00000411556 1431 ntBASIC5.77□□□□□ -1.49
SHFQ7M4L6 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHFQ7M4L6 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 EEF1GP6-201ENST00000402309 905 ntBASIC5.77□□□□□ -1.49
SHFQ7M4L6 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHFQ7M4L6 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.77□□□□□ -1.49
SHFQ7M4L6 CLCN3P1-201ENST00000423965 1017 ntBASIC5.77□□□□□ -1.49
SHFQ7M4L6 RPL7AP14-201ENST00000424041 802 ntBASIC5.77□□□□□ -1.49
SHFQ7M4L6 FDPSP6-201ENST00000425091 512 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms