Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.28□□□□□ -1.24
GABPAQ06546 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.28□□□□□ -1.24
GABPAQ06546 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.28□□□□□ -1.24
GABPAQ06546 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.28□□□□□ -1.24
GABPAQ06546 SUGT1P2-201ENST00000379452 992 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
GABPAQ06546 RNU11-6P-201ENST00000391127 133 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.28□□□□□ -1.24
GABPAQ06546 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.28□□□□□ -1.24
GABPAQ06546 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 AL512593.1-201ENST00000444758 779 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 FTLP8-201ENST00000446770 267 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 SUMO2P10-201ENST00000452006 288 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.28□□□□□ -1.24
GABPAQ06546 IGKV2-4-201ENST00000523070 340 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 KCTD9P4-201ENST00000526766 1166 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 AC092865.1-201ENST00000544395 1023 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.28□□□□□ -1.24
GABPAQ06546 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.28□□□□□ -1.24
GABPAQ06546 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.28□□□□□ -1.24
GABPAQ06546 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.28□□□□□ -1.24
GABPAQ06546 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 SNX18P12-201ENST00000624821 759 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 AC022726.2-201ENST00000634673 547 ntBASIC7.28□□□□□ -1.24
GABPAQ06546 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.28□□□□□ -1.24
GABPAQ06546 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
GABPAQ06546 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.28□□□□□ -1.24
GABPAQ06546 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
GABPAQ06546 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.27□□□□□ -1.24
GABPAQ06546 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.27□□□□□ -1.24
GABPAQ06546 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.27□□□□□ -1.24
GABPAQ06546 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
GABPAQ06546 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.27□□□□□ -1.25
GABPAQ06546 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
GABPAQ06546 RNA5SP122-201ENST00000384457 108 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 MIR433-201ENST00000384837 93 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 AL132875.1-201ENST00000403623 949 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 RNA5SP156-201ENST00000410250 110 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 HMGN1P20-201ENST00000411849 300 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 SLC20A1P1-201ENST00000413906 956 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.27□□□□□ -1.25
GABPAQ06546 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.27□□□□□ -1.25
GABPAQ06546 NAP1L4P2-201ENST00000425958 899 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.27□□□□□ -1.25
GABPAQ06546 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.27□□□□□ -1.25
GABPAQ06546 RPS27AP3-201ENST00000453803 454 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 AC006499.4-201ENST00000510947 694 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 OR5H7P-201ENST00000514084 930 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.27□□□□□ -1.25
GABPAQ06546 AP004607.6-201ENST00000525033 1202 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.27□□□□□ -1.25
GABPAQ06546 AC068305.2-201ENST00000550567 1205 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.27□□□□□ -1.25
GABPAQ06546 NPIPB1P-202ENST00000588786 828 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 AP002345.2-201ENST00000609961 904 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 AL136228.1-201ENST00000622221 319 ntBASIC7.27□□□□□ -1.25
GABPAQ06546 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.27□□□□□ -1.25
GABPAQ06546 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
GABPAQ06546 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.27□□□□□ -1.25
GABPAQ06546 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
GABPAQ06546 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
GABPAQ06546 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.26□□□□□ -1.25
GABPAQ06546 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
GABPAQ06546 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
GABPAQ06546 AC005618.1-201ENST00000606901 3148 ntBASIC7.26□□□□□ -1.25
GABPAQ06546 AC119674.1-202ENST00000641333 1860 ntBASIC7.26□□□□□ -1.25
GABPAQ06546 AC009135.2-201ENST00000624136 1768 ntBASIC7.26□□□□□ -1.25
GABPAQ06546 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.26□□□□□ -1.25
GABPAQ06546 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
GABPAQ06546 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.26□□□□□ -1.25
GABPAQ06546 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
GABPAQ06546 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
GABPAQ06546 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.26□□□□□ -1.25
GABPAQ06546 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
GABPAQ06546 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.26□□□□□ -1.25
GABPAQ06546 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.26□□□□□ -1.25
GABPAQ06546 GAPDHP75-201ENST00000433910 943 ntBASIC7.26□□□□□ -1.25
GABPAQ06546 TRIM60P16-201ENST00000444048 694 ntBASIC7.26□□□□□ -1.25
GABPAQ06546 RN7SL193P-201ENST00000491708 276 ntBASIC7.26□□□□□ -1.25
GABPAQ06546 Y_RNA.667-201ENST00000516212 107 ntBASIC7.26□□□□□ -1.25
GABPAQ06546 RNA5SP438-201ENST00000516561 112 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms