Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CCNA1P78396 ABCA11P-202ENST00000504019 2110 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.19□□□□□ -1.26
CCNA1P78396 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCNA1P78396 AL589993.1-201ENST00000407450 2524 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCNA1P78396 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCNA1P78396 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.19□□□□□ -1.26
CCNA1P78396 RPS7P8-201ENST00000418311 581 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.19□□□□□ -1.26
CCNA1P78396 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.19□□□□□ -1.26
CCNA1P78396 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.19□□□□□ -1.26
CCNA1P78396 AC068305.2-201ENST00000550567 1205 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 DPPA3P2-201ENST00000553589 478 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.19□□□□□ -1.26
CCNA1P78396 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCNA1P78396 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.19□□□□□ -1.26
CCNA1P78396 AP000641.1-201ENST00000531988 1639 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCNA1P78396 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCNA1P78396 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CCNA1P78396 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.19□□□□□ -1.26
CCNA1P78396 AL359195.2-201ENST00000623657 4412 ntBASIC7.19□□□□□ -1.26
CCNA1P78396 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.19□□□□□ -1.26
CCNA1P78396 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCNA1P78396 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CCNA1P78396 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CCNA1P78396 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.18□□□□□ -1.26
CCNA1P78396 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
CCNA1P78396 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 TMSB4XP4-201ENST00000323496 618 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 RNA5SP273-201ENST00000362484 113 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 RNU1-49P-201ENST00000363468 159 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.18□□□□□ -1.26
CCNA1P78396 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 SEPT14P12-201ENST00000442280 560 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 AL161636.2-201ENST00000445179 927 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 Y_RNA.667-201ENST00000516212 107 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 SCARNA18.1-201ENST00000516330 83 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 OR4A13P-201ENST00000529316 942 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.18□□□□□ -1.26
CCNA1P78396 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.18□□□□□ -1.26
CCNA1P78396 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.18□□□□□ -1.26
CCNA1P78396 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.18□□□□□ -1.26
CCNA1P78396 AL953862.2-201ENST00000603089 820 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.18□□□□□ -1.26
CCNA1P78396 AC130448.2-201ENST00000624082 374 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 AC073488.3-201ENST00000631611 778 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.18□□□□□ -1.26
CCNA1P78396 AL133243.2-201ENST00000610331 1621 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 ZNF969P-201ENST00000510345 2341 ntBASIC7.18□□□□□ -1.26
CCNA1P78396 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.18□□□□□ -1.26
CCNA1P78396 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.18□□□□□ -1.26
CCNA1P78396 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
CCNA1P78396 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCNA1P78396 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CCNA1P78396 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.17□□□□□ -1.26
CCNA1P78396 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 AC008171.1-201ENST00000395058 200 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AL050335.1-201ENST00000396909 869 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AL132875.1-201ENST00000403623 949 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC245096.1-201ENST00000413104 546 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 AL713922.1-201ENST00000416477 747 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 AC005077.1-201ENST00000449226 375 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC011476.1-201ENST00000466725 307 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC092865.4-201ENST00000477936 615 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.17□□□□□ -1.26
CCNA1P78396 RNA5SP434-201ENST00000516647 121 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.17□□□□□ -1.26
CCNA1P78396 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.17□□□□□ -1.26
CCNA1P78396 AP001858.2-201ENST00000536213 601 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.17□□□□□ -1.26
CCNA1P78396 AC079600.1-201ENST00000550326 297 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms