Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MIR323B-201ENST00000385269 82 ntBASIC5.5□□□□□ -1.53
UBA52P62987 NPM1P37-201ENST00000403105 874 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AL354868.1-201ENST00000417077 482 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.5□□□□□ -1.53
UBA52P62987 LSM3P3-201ENST00000436601 306 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.5□□□□□ -1.53
UBA52P62987 GAPDHP20-201ENST00000444107 1007 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC097359.1-201ENST00000447946 463 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC093166.3-201ENST00000448785 303 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC016724.1-201ENST00000453215 421 ntBASIC5.5□□□□□ -1.53
UBA52P62987 CCNJP2-201ENST00000457810 1163 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC099340.1-201ENST00000475247 599 ntBASIC5.5□□□□□ -1.53
UBA52P62987 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.5□□□□□ -1.53
UBA52P62987 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.5□□□□□ -1.53
UBA52P62987 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 AC097486.1-201ENST00000515331 210 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC011853.1-201ENST00000518911 454 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.5□□□□□ -1.53
UBA52P62987 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.5□□□□□ -1.53
UBA52P62987 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.5□□□□□ -1.53
UBA52P62987 AC134669.1-201ENST00000581275 672 ntBASIC5.5□□□□□ -1.53
UBA52P62987 RPL29P33-201ENST00000587474 316 ntBASIC5.5□□□□□ -1.53
UBA52P62987 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.5□□□□□ -1.53
UBA52P62987 AC011891.2-201ENST00000604949 397 ntBASIC5.5□□□□□ -1.53
UBA52P62987 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.5□□□□□ -1.53
UBA52P62987 MIR6071-201ENST00000616741 78 ntBASIC5.5□□□□□ -1.53
UBA52P62987 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AC000095.2-202ENST00000637415 154 ntBASIC5.5□□□□□ -1.53
UBA52P62987 AL121936.2-201ENST00000641935 662 ntBASIC5.5□□□□□ -1.53
UBA52P62987 CASC19-274ENST00000642018 970 ntBASIC5.5□□□□□ -1.53
UBA52P62987 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.5□□□□□ -1.53
UBA52P62987 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
UBA52P62987 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
UBA52P62987 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 AL359976.1-201ENST00000418655 3528 ntBASIC5.5□□□□□ -1.53
UBA52P62987 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.5□□□□□ -1.53
UBA52P62987 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
UBA52P62987 AC096992.2-201ENST00000609553 1684 ntBASIC5.5□□□□□ -1.53
UBA52P62987 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.5□□□□□ -1.53
UBA52P62987 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
UBA52P62987 AL591135.1-201ENST00000401578 5914 ntBASIC5.49□□□□□ -1.53
UBA52P62987 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.49□□□□□ -1.53
UBA52P62987 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
UBA52P62987 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 RNA5SP350-201ENST00000363298 111 ntBASIC5.49□□□□□ -1.53
UBA52P62987 RN7SKP47-201ENST00000365347 328 ntBASIC5.49□□□□□ -1.53
UBA52P62987 RN7SKP269-201ENST00000365545 319 ntBASIC5.49□□□□□ -1.53
UBA52P62987 VIM2P-201ENST00000402383 1294 ntBASIC5.49□□□□□ -1.53
UBA52P62987 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.49□□□□□ -1.53
UBA52P62987 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.49□□□□□ -1.53
UBA52P62987 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.49□□□□□ -1.53
UBA52P62987 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.49□□□□□ -1.53
UBA52P62987 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 RPSAP40-201ENST00000442343 891 ntBASIC5.49□□□□□ -1.53
UBA52P62987 AC068491.1-201ENST00000449539 1241 ntBASIC5.49□□□□□ -1.53
UBA52P62987 NMNAT1P3-201ENST00000457517 888 ntBASIC5.49□□□□□ -1.53
UBA52P62987 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 RN7SL379P-201ENST00000479912 293 ntBASIC5.49□□□□□ -1.53
UBA52P62987 AC083906.1-201ENST00000509298 406 ntBASIC5.49□□□□□ -1.53
UBA52P62987 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 MAST4-IT1-201ENST00000514241 658 ntBASIC5.49□□□□□ -1.53
UBA52P62987 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.49□□□□□ -1.53
UBA52P62987 TOMM20P1-201ENST00000534518 427 ntBASIC5.49□□□□□ -1.53
UBA52P62987 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 TDGP1-201ENST00000543961 1229 ntBASIC5.49□□□□□ -1.53
UBA52P62987 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
UBA52P62987 AC005519.1-201ENST00000554490 601 ntBASIC5.49□□□□□ -1.53
UBA52P62987 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.49□□□□□ -1.53
UBA52P62987 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.49□□□□□ -1.53
UBA52P62987 AL109924.4-201ENST00000623089 670 ntBASIC5.49□□□□□ -1.53
UBA52P62987 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.49□□□□□ -1.53
UBA52P62987 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.49□□□□□ -1.53
UBA52P62987 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms