Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC236972.4-201ENST00000458091 963 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 HMGN1P8-201ENST00000463578 288 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 RPS7P10-201ENST00000464254 603 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN20P56880 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 AC022415.1-202ENST00000486612 523 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN20P56880 SCARNA5-201ENST00000516201 276 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC116917.1-201ENST00000520558 305 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC130364.2-201ENST00000528639 604 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN20P56880 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.9□□□□□ -1.46
CLDN20P56880 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLDN20P56880 AC025283.1-201ENST00000572039 734 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC138207.8-204ENST00000579588 527 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.9□□□□□ -1.46
CLDN20P56880 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 AL157899.1-201ENST00000604110 936 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 GMCL1P2-201ENST00000605230 823 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC097467.4-201ENST00000605504 141 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AL031658.2-201ENST00000616850 651 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN20P56880 AC005393.1-201ENST00000617916 584 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.9□□□□□ -1.46
CLDN20P56880 AC089999.3-201ENST00000622440 577 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 AC114546.4-201ENST00000624413 369 ntBASIC5.9□□□□□ -1.46
CLDN20P56880 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.9□□□□□ -1.46
CLDN20P56880 AC110373.1-201ENST00000505994 3505 ntBASIC5.9□□□□□ -1.47
CLDN20P56880 CASC19-228ENST00000641414 1684 ntBASIC5.9□□□□□ -1.47
CLDN20P56880 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.9□□□□□ -1.47
CLDN20P56880 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN20P56880 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN20P56880 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.9□□□□□ -1.47
CLDN20P56880 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CLDN20P56880 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN20P56880 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.9□□□□□ -1.47
CLDN20P56880 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.9□□□□□ -1.47
CLDN20P56880 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.9□□□□□ -1.47
CLDN20P56880 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CLDN20P56880 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CLDN20P56880 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CLDN20P56880 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
CLDN20P56880 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLDN20P56880 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 SNORD8-201ENST00000363915 110 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 RNU1-84P-201ENST00000365447 164 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.89□□□□□ -1.47
CLDN20P56880 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 MRPS21P5-201ENST00000417885 231 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 RPL7AP51-201ENST00000422016 760 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AC021876.1-201ENST00000425959 359 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 Z68868.1-201ENST00000429048 544 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 LINC00328-2P-201ENST00000436585 219 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 MTND3P4-201ENST00000453537 303 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 MTCYBP14-201ENST00000457471 715 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 RPL23AP64-201ENST00000469465 435 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.89□□□□□ -1.47
CLDN20P56880 AP002981.1-201ENST00000517692 975 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 IGHV3-57-201ENST00000520143 280 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 AP001000.1-201ENST00000526843 742 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.89□□□□□ -1.47
CLDN20P56880 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.89□□□□□ -1.47
CLDN20P56880 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.89□□□□□ -1.47
CLDN20P56880 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN20P56880 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 RN7SL208P-201ENST00000577964 296 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 WBP1LP11-201ENST00000586141 328 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.89□□□□□ -1.47
CLDN20P56880 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN20P56880 AL078623.1-201ENST00000602702 907 ntBASIC5.89□□□□□ -1.47
CLDN20P56880 AC004805.3-201ENST00000603178 310 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 281.5 ms