Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.68□□□□□ -1.66
CMC4P56277 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.68□□□□□ -1.66
CMC4P56277 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.68□□□□□ -1.66
CMC4P56277 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.68□□□□□ -1.66
CMC4P56277 AP001000.1-201ENST00000526843 742 ntBASIC4.68□□□□□ -1.66
CMC4P56277 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.68□□□□□ -1.66
CMC4P56277 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.68□□□□□ -1.66
CMC4P56277 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.68□□□□□ -1.66
CMC4P56277 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.68□□□□□ -1.66
CMC4P56277 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.68□□□□□ -1.66
CMC4P56277 MIR3154-201ENST00000577829 84 ntBASIC4.68□□□□□ -1.66
CMC4P56277 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.68□□□□□ -1.66
CMC4P56277 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.68□□□□□ -1.66
CMC4P56277 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.68□□□□□ -1.66
CMC4P56277 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.68□□□□□ -1.66
CMC4P56277 SMIM12P1-201ENST00000603004 274 ntBASIC4.68□□□□□ -1.66
CMC4P56277 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.68□□□□□ -1.66
CMC4P56277 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.68□□□□□ -1.66
CMC4P56277 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 AC005618.1-201ENST00000606901 3148 ntBASIC4.68□□□□□ -1.66
CMC4P56277 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.68□□□□□ -1.66
CMC4P56277 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CMC4P56277 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CMC4P56277 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.68□□□□□ -1.66
CMC4P56277 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CMC4P56277 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CMC4P56277 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.68□□□□□ -1.66
CMC4P56277 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 RNA5SP77-201ENST00000365394 120 ntBASIC4.67□□□□□ -1.66
CMC4P56277 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 MIR188-201ENST00000385034 86 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.67□□□□□ -1.66
CMC4P56277 AL139158.1-201ENST00000424719 340 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AC112492.2-201ENST00000432774 1030 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AC094019.1-201ENST00000434678 472 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 TRIM60P16-201ENST00000444048 694 ntBASIC4.67□□□□□ -1.66
CMC4P56277 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 AL022237.1-201ENST00000446663 358 ntBASIC4.67□□□□□ -1.66
CMC4P56277 RPL23AP60-201ENST00000450011 454 ntBASIC4.67□□□□□ -1.66
CMC4P56277 HIGD1AP16-201ENST00000450986 258 ntBASIC4.67□□□□□ -1.66
CMC4P56277 RN7SL352P-201ENST00000466002 277 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AC005165.2-201ENST00000466070 380 ntBASIC4.67□□□□□ -1.66
CMC4P56277 FTH1P8-201ENST00000498161 514 ntBASIC4.67□□□□□ -1.66
CMC4P56277 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.67□□□□□ -1.66
CMC4P56277 MAST4-IT1-201ENST00000514241 658 ntBASIC4.67□□□□□ -1.66
CMC4P56277 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.67□□□□□ -1.66
CMC4P56277 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.67□□□□□ -1.66
CMC4P56277 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.67□□□□□ -1.66
CMC4P56277 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.67□□□□□ -1.66
CMC4P56277 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.67□□□□□ -1.66
CMC4P56277 SETP3-201ENST00000581726 813 ntBASIC4.67□□□□□ -1.66
CMC4P56277 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 AC011497.2-201ENST00000600255 639 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AC005828.7-201ENST00000607331 556 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AL359091.2-201ENST00000609303 556 ntBASIC4.67□□□□□ -1.66
CMC4P56277 MIR7109-201ENST00000613748 65 ntBASIC4.67□□□□□ -1.66
CMC4P56277 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.67□□□□□ -1.66
CMC4P56277 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 AL359976.1-201ENST00000418655 3528 ntBASIC4.67□□□□□ -1.66
CMC4P56277 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 AC092692.1-201ENST00000623625 2595 ntBASIC4.67□□□□□ -1.66
CMC4P56277 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 AC110597.1-201ENST00000562669 3176 ntBASIC4.67□□□□□ -1.66
CMC4P56277 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.67□□□□□ -1.66
CMC4P56277 MAPK10-287ENST00000641217 3037 ntBASIC4.67□□□□□ -1.66
CMC4P56277 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC4.67□□□□□ -1.66
CMC4P56277 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CMC4P56277 SHQ1P1-201ENST00000437111 1544 ntBASIC4.67□□□□□ -1.66
CMC4P56277 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms